Gene Ndas_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0989 
Symbol 
ID9244835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1209058 
End bp1210062 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content73% 
IMG OID 
ProductArabinan endo-1,5-alpha-L-arabinosidase 
Protein accessionYP_003678939 
Protein GI297559965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0127699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAC ACCCGCACAC CCTCTCCCGC CGCAGAATGC TGGGCTCCGC CCTGGCCGCG 
GGAGCGCTGG CCGCGACCAC GACCGCCGCC GACGCGGTCG GCGCCCGGCC CGCGGCGGCC
GCCGACTACC CCGGACCCGG CCATGTGACC GGCGACGTCC GGGTGCACGA CCCGTCCTTC
GTCAAGCGGC CCGGGGGCGG CTACCTGATC GCCCACACCG GCGACGACGT GGCCCTGAAG
ACCTCCGCCG ACCGGACCGC CTTCCGCGAC GCGGGTCCGG CCTTCCCCGG CGGCGCCCCG
TGGACCAGCC CCTACACGGG CGGCGCGCGC AACCTGTGGG CCCCGCACCT GTCCCACGCC
GACGGGCGCT ACCGCCTCTA CTACTCCGCC TCGACCTTCG GCTCCAACCG GTCCGCGATC
TTCCTGGCCA CCAGCACCAG CGGGGACTCG GGCACCTGGC GCGACGAGGG CCTGGTCATC
GAGTCGTTCC CCTCCGACGA CTTCAACGCC ATCGACCCCC ATCTGGAGGT GGACGGCCAG
GGCCGCTGGT GGCTGGCGTT CGGCTCGTTC TGGTCGGGGA TCAAGATGGT GCGCATCGAC
CCGGCGACCG GCAAGCGCGG CGACCGCGTC CTGCACTCGA TCGCGGGCCG CGGCGGCGAC
GCCGTCGAGG CGCCGACCCT CTTCCAGCGC GACGGCTGGT ACTACCTGTT CGTCTCCTTC
GACCTGTGCT GCCGGGGAGC GGACAGCACC TACCGCATCA TGGTCGGCCG CTCCACCAGC
ATCACCGGCC CCTATCGCGA CCGCGCCGGA AGGGCCATGA CCGCGGGCGG CGGCACCGAG
GTCCTGTCCG GCCACGGCGG CGTGCACGGC CCCGGCCACC AGGACGTCTT CGCCGACACC
GACCACGACA TCCTCGCCTA CCACTACTAC GCCGACGACG GCACGGCGCT GCTGGGCGTC
AACTGGCTCG GCTGGGACTC CGCCGGATGG CCGTACGTGC ACTGA
 
Protein sequence
MTEHPHTLSR RRMLGSALAA GALAATTTAA DAVGARPAAA ADYPGPGHVT GDVRVHDPSF 
VKRPGGGYLI AHTGDDVALK TSADRTAFRD AGPAFPGGAP WTSPYTGGAR NLWAPHLSHA
DGRYRLYYSA STFGSNRSAI FLATSTSGDS GTWRDEGLVI ESFPSDDFNA IDPHLEVDGQ
GRWWLAFGSF WSGIKMVRID PATGKRGDRV LHSIAGRGGD AVEAPTLFQR DGWYYLFVSF
DLCCRGADST YRIMVGRSTS ITGPYRDRAG RAMTAGGGTE VLSGHGGVHG PGHQDVFADT
DHDILAYHYY ADDGTALLGV NWLGWDSAGW PYVH