Gene Ndas_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0943 
Symbol 
ID9244788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1158017 
End bp1159819 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content73% 
IMG OID 
Product2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 
Protein accessionYP_003678893 
Protein GI297559919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0237755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0842167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTT CCGTTTCCAT GCCCGCCCTG GGTGAGAGCG TCACCGAGGG CACCGTCACC 
CAGTGGCTGA AGAACGTGGG CGACACCGTC GAGGTGGACG AACCGCTCCT GGAGGTCTCC
ACCGACAAGG TGGACACCGA GATTCCCTCA CCCGTCGCGG GCGTACTCAC CAAGATCCTC
GTCGACGAGG ACGAGACCGT GGAGATCGGC GCGGAGATCG CCGTCATCGG CGGTGAGGGC
GAGGGCGCCG ACGACGAGGG CGGCGCCGAG CCCGCGGCCG AGGAGTCCGC GCAGGAGCCC
GAGGAGACCG AGAAGCCCGA GGAGGGGGCC GCCGAGGAGC CCGAGCCGGA GCCCGCCCCC
GAGCCCGAGT CCGGGGCCGG CGCGCGGGCC TCGTCCTCCG ACCGGGGCCC GACCACGTCG
GTGACCATGC CCGCCCTGGG TGAGAGCGTC ACCGAGGGCA CCGTCACCCA GTGGCTCAAG
AGCGTGGGCG ACACCGTCGA GGTGGACGAA CCGCTCCTGG AGGTCTCCAC CGACAAGGTG
GACACCGAGA TTCCCTCACC CGTCGCGGGC GTACTCACCA AGATCCTCGT CGACGAGGAC
GAGACCGTGG AGATCGGCGC GGAGATCGCC GTCATCGGCG GCACCGGGGA CGAGCCCCCG
GCCGTCTCCG AGGGCGCGGC CCCGGCCGAG GCCGAGCCCA AGGCCGAACC GGTGTCGGAG
CCCGAGCCCG CCGAGGCCGA GCCCGCCGCG CCCGCCCCGA AGGCCGAGGC CGAGCCCGAG
CCCGCCGCGG ACCGGGACAA GGACGGCGAG AGCCCGTCCG TGGACATCGG CACCCTCAGC
GGCACCGGCC GCGCCTCGGG TACCGACGCC GGGACCGAGG CGTACGTGAC CCCGCTGGTG
CGCAAGCTCG CCTCCGAGCA CGGCGTGAAC CTCAGCCGTG TCAAGGGCAC CGGCGTGGGC
GGCCGCGTCC GCAAGCAGGA CGTGCTCAAG GCCGCCGAGG AGCAGAAGGC CGACGCCGCG
CGCGCCGCCG CCCCCGCGCC GTCCTCGGCC CCGCGCAAGG GGGCCACCGA CACCTCCCTG
CGCGGCCGTA CCGAGAAGCT CACCCGCCTG CGCCTGTCCA TCGCGGACCG GATGGTGGAG
TCGCTGCACG TCTCGGCCAC GACCACGCAG GTCATCGAGG TGGACGTCAC CAAGATCGCC
CGCCTGCGCG AGCACTCCGC CGAGCGCTTC GCCGAGCGCG AGGACGTGCG GCTGGACTTC
TTCCCGTTCT TCGCGCTGGC CGCGGTGGAG GCCCTGCGCT CCCACCCCAA GCTCAACGCC
GTGATCGACA GCGACAAGCA GGAGGTGACC TACCACGACG TGGAGAACCT CGGCGTCTCG
GTGGACACCG AGCGCGGTCT GCTGGCCCCC GTGGTCAAGG ACGCGGGCAA GCTGGGCCTG
GGTGAGCTGG CGCGCAGGCT CAAGGACCTG ACCGAGCGCG CCCACACCGG CCAGCTGGGC
CCGGACGAGC TGGGCGGCGG CACGTTCACC ATCGCCGAGA CCGGCTGCAC CGGCGCGCTG
TTCGGCACGC CGATCATCAA CCAGCCGCAG GTGGCCATCC TGGGCACCGG CGCGGTCGTC
AAGCGCCCCG TCGTGGTCGA GGACACCGCC ATGGGCGACG AGGTGATCGC GGTCCGCTCG
ATGGTGTACC TGTCGCTGGC CCACGACCAC CGCCTGATCG ACAGCGCCGA CGCCGGGCGC
TTCCTCCAGA GCGTGAAGGC GCGTCTGGAG GAGGGCGCCT TCGAGGACGA CCTGGGCCTG
TAG
 
Protein sequence
MPTSVSMPAL GESVTEGTVT QWLKNVGDTV EVDEPLLEVS TDKVDTEIPS PVAGVLTKIL 
VDEDETVEIG AEIAVIGGEG EGADDEGGAE PAAEESAQEP EETEKPEEGA AEEPEPEPAP
EPESGAGARA SSSDRGPTTS VTMPALGESV TEGTVTQWLK SVGDTVEVDE PLLEVSTDKV
DTEIPSPVAG VLTKILVDED ETVEIGAEIA VIGGTGDEPP AVSEGAAPAE AEPKAEPVSE
PEPAEAEPAA PAPKAEAEPE PAADRDKDGE SPSVDIGTLS GTGRASGTDA GTEAYVTPLV
RKLASEHGVN LSRVKGTGVG GRVRKQDVLK AAEEQKADAA RAAAPAPSSA PRKGATDTSL
RGRTEKLTRL RLSIADRMVE SLHVSATTTQ VIEVDVTKIA RLREHSAERF AEREDVRLDF
FPFFALAAVE ALRSHPKLNA VIDSDKQEVT YHDVENLGVS VDTERGLLAP VVKDAGKLGL
GELARRLKDL TERAHTGQLG PDELGGGTFT IAETGCTGAL FGTPIINQPQ VAILGTGAVV
KRPVVVEDTA MGDEVIAVRS MVYLSLAHDH RLIDSADAGR FLQSVKARLE EGAFEDDLGL