Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0943 |
Symbol | |
ID | 9244788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 1158017 |
End bp | 1159819 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
Protein accession | YP_003678893 |
Protein GI | 297559919 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0237755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0842167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACTT CCGTTTCCAT GCCCGCCCTG GGTGAGAGCG TCACCGAGGG CACCGTCACC CAGTGGCTGA AGAACGTGGG CGACACCGTC GAGGTGGACG AACCGCTCCT GGAGGTCTCC ACCGACAAGG TGGACACCGA GATTCCCTCA CCCGTCGCGG GCGTACTCAC CAAGATCCTC GTCGACGAGG ACGAGACCGT GGAGATCGGC GCGGAGATCG CCGTCATCGG CGGTGAGGGC GAGGGCGCCG ACGACGAGGG CGGCGCCGAG CCCGCGGCCG AGGAGTCCGC GCAGGAGCCC GAGGAGACCG AGAAGCCCGA GGAGGGGGCC GCCGAGGAGC CCGAGCCGGA GCCCGCCCCC GAGCCCGAGT CCGGGGCCGG CGCGCGGGCC TCGTCCTCCG ACCGGGGCCC GACCACGTCG GTGACCATGC CCGCCCTGGG TGAGAGCGTC ACCGAGGGCA CCGTCACCCA GTGGCTCAAG AGCGTGGGCG ACACCGTCGA GGTGGACGAA CCGCTCCTGG AGGTCTCCAC CGACAAGGTG GACACCGAGA TTCCCTCACC CGTCGCGGGC GTACTCACCA AGATCCTCGT CGACGAGGAC GAGACCGTGG AGATCGGCGC GGAGATCGCC GTCATCGGCG GCACCGGGGA CGAGCCCCCG GCCGTCTCCG AGGGCGCGGC CCCGGCCGAG GCCGAGCCCA AGGCCGAACC GGTGTCGGAG CCCGAGCCCG CCGAGGCCGA GCCCGCCGCG CCCGCCCCGA AGGCCGAGGC CGAGCCCGAG CCCGCCGCGG ACCGGGACAA GGACGGCGAG AGCCCGTCCG TGGACATCGG CACCCTCAGC GGCACCGGCC GCGCCTCGGG TACCGACGCC GGGACCGAGG CGTACGTGAC CCCGCTGGTG CGCAAGCTCG CCTCCGAGCA CGGCGTGAAC CTCAGCCGTG TCAAGGGCAC CGGCGTGGGC GGCCGCGTCC GCAAGCAGGA CGTGCTCAAG GCCGCCGAGG AGCAGAAGGC CGACGCCGCG CGCGCCGCCG CCCCCGCGCC GTCCTCGGCC CCGCGCAAGG GGGCCACCGA CACCTCCCTG CGCGGCCGTA CCGAGAAGCT CACCCGCCTG CGCCTGTCCA TCGCGGACCG GATGGTGGAG TCGCTGCACG TCTCGGCCAC GACCACGCAG GTCATCGAGG TGGACGTCAC CAAGATCGCC CGCCTGCGCG AGCACTCCGC CGAGCGCTTC GCCGAGCGCG AGGACGTGCG GCTGGACTTC TTCCCGTTCT TCGCGCTGGC CGCGGTGGAG GCCCTGCGCT CCCACCCCAA GCTCAACGCC GTGATCGACA GCGACAAGCA GGAGGTGACC TACCACGACG TGGAGAACCT CGGCGTCTCG GTGGACACCG AGCGCGGTCT GCTGGCCCCC GTGGTCAAGG ACGCGGGCAA GCTGGGCCTG GGTGAGCTGG CGCGCAGGCT CAAGGACCTG ACCGAGCGCG CCCACACCGG CCAGCTGGGC CCGGACGAGC TGGGCGGCGG CACGTTCACC ATCGCCGAGA CCGGCTGCAC CGGCGCGCTG TTCGGCACGC CGATCATCAA CCAGCCGCAG GTGGCCATCC TGGGCACCGG CGCGGTCGTC AAGCGCCCCG TCGTGGTCGA GGACACCGCC ATGGGCGACG AGGTGATCGC GGTCCGCTCG ATGGTGTACC TGTCGCTGGC CCACGACCAC CGCCTGATCG ACAGCGCCGA CGCCGGGCGC TTCCTCCAGA GCGTGAAGGC GCGTCTGGAG GAGGGCGCCT TCGAGGACGA CCTGGGCCTG TAG
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Protein sequence | MPTSVSMPAL GESVTEGTVT QWLKNVGDTV EVDEPLLEVS TDKVDTEIPS PVAGVLTKIL VDEDETVEIG AEIAVIGGEG EGADDEGGAE PAAEESAQEP EETEKPEEGA AEEPEPEPAP EPESGAGARA SSSDRGPTTS VTMPALGESV TEGTVTQWLK SVGDTVEVDE PLLEVSTDKV DTEIPSPVAG VLTKILVDED ETVEIGAEIA VIGGTGDEPP AVSEGAAPAE AEPKAEPVSE PEPAEAEPAA PAPKAEAEPE PAADRDKDGE SPSVDIGTLS GTGRASGTDA GTEAYVTPLV RKLASEHGVN LSRVKGTGVG GRVRKQDVLK AAEEQKADAA RAAAPAPSSA PRKGATDTSL RGRTEKLTRL RLSIADRMVE SLHVSATTTQ VIEVDVTKIA RLREHSAERF AEREDVRLDF FPFFALAAVE ALRSHPKLNA VIDSDKQEVT YHDVENLGVS VDTERGLLAP VVKDAGKLGL GELARRLKDL TERAHTGQLG PDELGGGTFT IAETGCTGAL FGTPIINQPQ VAILGTGAVV KRPVVVEDTA MGDEVIAVRS MVYLSLAHDH RLIDSADAGR FLQSVKARLE EGAFEDDLGL
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