Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0825 |
Symbol | |
ID | 9244670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1016117 |
End bp | 1016866 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | protein of unknown function DUF28 |
Protein accession | YP_003678775 |
Protein GI | 297559801 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.141355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0381393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCC ACTCCAAGTG GGCCACCACC AAGCACAAGA AAGCCGTCAT CGATGCCAAG CGCGGCAAGC TCTTCGCCAA GCTGATCAAG AACATCGAGG TGGCCGCGCG TACCGGCGGT GGAGACCCCG ACGGGAACCC CACGCTCTAC GACGCCATCC AGAAGGCGCG CAAGAACTCC GTGCCGCTCG ACAACATCGA GCGCGCCCGC AAGCGCGGCT CCGGCGAGGA GGCGGGCGGC GCCGAGTGGC AGACCATCAT GTACGAGGGC TACGCCGCCG GTGGCGTAGC CCTGCTGGTG GAGTGCCTGA CCGACAACCG CAACCGTGCC GCCTCCGAGG TGCGCGTGGC CGTGTCCCGC AACGGCGGCA ACATGGCCGA CGCCGGTTCG GTCTCCTACC TCTTCAACCG CAAGGGCGTC GTCATCGTGC CCAAGGAGGG CACCACCGAG GACGACGTGA CCCTGGCGGT GCTGGAGGCC GGCGCCGAGG AGGTCGAGGA CCTGGGCGAA TCCTTCGAGA TCGTCTGCGA GGCCACCGAC CTGGTCGCCG TGCGCACCGC GCTCCAGGAG GCGGGCATCG AGTACGACTC CGCCGAATCC AGCTTCCTGC CGACCATGGA GGTCCCGGTC GACGCCGAGA CCGCCAAGAA GGTCATGCGG GTGGTGGACG CGCTGGAGGA CTCCGACGAC GTGCAGAACG TCTTCACCAA CGCCGACATC CCCGACGAGG TCATGGCCGA GATCAGCTGA
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Protein sequence | MSGHSKWATT KHKKAVIDAK RGKLFAKLIK NIEVAARTGG GDPDGNPTLY DAIQKARKNS VPLDNIERAR KRGSGEEAGG AEWQTIMYEG YAAGGVALLV ECLTDNRNRA ASEVRVAVSR NGGNMADAGS VSYLFNRKGV VIVPKEGTTE DDVTLAVLEA GAEEVEDLGE SFEIVCEATD LVAVRTALQE AGIEYDSAES SFLPTMEVPV DAETAKKVMR VVDALEDSDD VQNVFTNADI PDEVMAEIS
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