Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0802 |
Symbol | |
ID | 9244647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 988245 |
End bp | 990545 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase |
Protein accession | YP_003678752 |
Protein GI | 297559778 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACGA CCCCCGCGCC GTCCGCGGCC CCGGGCGGAC CACGCCCCTC CGTGCGCTCG ACCGTGCACG GCTACCCGCG CATCGGCCCC GCCCGCGAGC TCAAGCGCGC CTGCGAGTCC CACTGGAGGG GCCGCACCAC CGCCCGCGAA CTGGACGAGG TCGCCGCCGG GCTGCGCCTG GGCGTCTACG CCCAGCTGCG CGAGGCCGGT GTCGACGACA TCCCCTCCAA CACGTTCTCC TACTACGACC ACGTGCTGGA CACCGCGGTC CTGTTCGACC TGGTCCCCTC CCGCTTCGCC CCTCCCGCCG CGGCGGCGGA CCGCGAGGAG GAACTGCGCC GCTACTTCGC GCTCGCCCGC GGCGAACAGG GCGCCCCGCC GCTGGAGATG ACCAAGTGGT TCGACACGAA CTACCACTAC CTGGTCCCCG AGCTCTCGCC CGGCAGCCGT CCCCGCCTGG TGGGCGACAA GCCCGTCGCC GAGTTCCGAG AGGCGGCCGA GGCGGGTTTC CACACCCGCC CGGTCCTGGT CGGTCCTCTC ACCTTCCTGC TGCTGGCCAA GCCCGCCGAC GGCGCCCCCG AGGGCTGGGA ACCCGTCCAG CTGCTCGACC AGCTCCTGGA GGCCTACGCC CAGCTGCTCG GCGACCTGCG GGCCGCGGGC GCCACCGAGG TCCAGCTGGA CGAGCCGATC CTGGCCACCG ACGAGGGCCG CGCCGCCGTC GGCCACCTGG AGCGCGCCTA CCAGTACCTG GGCGCGGTCA CCGACCGCCC CTCCCTGCTG GTGTCCACCT ACTTCGGCTC CATCGGCTCC GCCGCCCTGC GCGTCCTCAA GGACTCCGCG GTCGAGGCGG TCGGCCTGGA CCTGGTCACC GACGACGAGG GCGTGGACGA CCTGGTGCGG GTCTCCGGCC TGGGCGCCAC CCGCCTGGTC GCGGGCGTGG TGGAGGGGCG CAACGTCTGG CGCACCGACA TCCCGGCCGC CGTCGCCGCG CTCGGTACCC TGCTCGCCCT CACCGACGAG CTGACCGTGA GCACCTCCTG CTCCCTGCTG CACGTGCCCC TGGACCTGGA CGCCGAGCCC TCCCTGGCCC CCGAGCTGCG CGGGGCCCTG GCCTTCGCCA AGCAGAAGGC CGAGGAGACG GCCCTGCTCG GCCGCGTGCT GTCCGAGGGC GCCGAGTCCG AGCACACCGG ACGGGGCGGC GTCCGTCCCC CCGCCTTCAC CGACGCGCGC GTGCGCGCCC GCCTCGACGC CCTGGGCCCG GACGCCTACG AGCGCCCGCG GGAACGCGGC AGGCCCACCG ACACCCCGCT CACCACGACC ACCATCGGGT CCTTCCCGCA GACCGCCGAG CTGCGCCGCG CCCGCGCCGC GCACCGCAGG GGGGAACTGG CGGAGGACGC CTACAAGGCC GTCCTGCGCG AGGAGATCGA CCGGGTCGTC GCGCTCCAGG AGGAGATCGG ACTGGATGTG CTCGTGCACG GCGAGCCCGA GCGCAACGAC ATGGTCCAGT ACTTCGCCGA GCAGCTGGAG GGCTACGCCA CCACCGAGAA CGGCTGGGTG CAGTCCTACG GTTCGCGGTG CGTGCGCCCG CCGATCCTGT TCGGCGACGT CTCGCGCCCC CAGCCGATGA CGGTCGAGTG GACCACCTAC GCCCAGTCGC GCACCGACAA GCCGGTCAAG GGCATGCTGA CCGGTCCGGT CACCATGCTC GCCTGGTCGT TCGTGCGCAC CGACCAGCCG CTGGGCGAGA CCGCACGCCA GGTGGCCTTG AGTTTGCGCG ACGAGGTCGC CGACCTGGAA CGCGCCGGGA TCCGCCATAT CCAGGTGGAC GAGGCGGCCC TGCGCGAACT GCTGCCGCTG CGCTCGGAGC ACCGGGCGCG GTACCTGGAC TGGGCGGTGG GCTCCTTCCG CCTGGCCACG TCGGGGGTGT CGCCGTCCAC GACCATCCAC ACGCACATGT GCTACTCGGA GTTCGGGCTG ATCGTCGGCG GCATCGAGGC GCTGGACGCC GACGTCACCA GCGTGGAGGC CGCCCGCTCG CGCATGGAGC TGGTGCGGGA CCTGGGCGAG CGCGGCTACG GGCGCGGGAT CGGCCCGGGC GTGTACGACA TCCACTCCCC GCGGGTGCCC TCGGTGGAGG AGATCGAGGG GGCGCTGCGG CTGGCGGTCG CGCACATCGA CGCCCGGAAC CTGTGGGTGA ACCCCGACTG CGGCCTCAAG ACGCGCGGTT ACGCCGAGGC CGAACAGGCC CTGCGCAACA TGGTCGAGGC GGCCCGCCGG GTGCGCGCCG ACCTGGCGTG A
|
Protein sequence | MTTTPAPSAA PGGPRPSVRS TVHGYPRIGP ARELKRACES HWRGRTTARE LDEVAAGLRL GVYAQLREAG VDDIPSNTFS YYDHVLDTAV LFDLVPSRFA PPAAAADREE ELRRYFALAR GEQGAPPLEM TKWFDTNYHY LVPELSPGSR PRLVGDKPVA EFREAAEAGF HTRPVLVGPL TFLLLAKPAD GAPEGWEPVQ LLDQLLEAYA QLLGDLRAAG ATEVQLDEPI LATDEGRAAV GHLERAYQYL GAVTDRPSLL VSTYFGSIGS AALRVLKDSA VEAVGLDLVT DDEGVDDLVR VSGLGATRLV AGVVEGRNVW RTDIPAAVAA LGTLLALTDE LTVSTSCSLL HVPLDLDAEP SLAPELRGAL AFAKQKAEET ALLGRVLSEG AESEHTGRGG VRPPAFTDAR VRARLDALGP DAYERPRERG RPTDTPLTTT TIGSFPQTAE LRRARAAHRR GELAEDAYKA VLREEIDRVV ALQEEIGLDV LVHGEPERND MVQYFAEQLE GYATTENGWV QSYGSRCVRP PILFGDVSRP QPMTVEWTTY AQSRTDKPVK GMLTGPVTML AWSFVRTDQP LGETARQVAL SLRDEVADLE RAGIRHIQVD EAALRELLPL RSEHRARYLD WAVGSFRLAT SGVSPSTTIH THMCYSEFGL IVGGIEALDA DVTSVEAARS RMELVRDLGE RGYGRGIGPG VYDIHSPRVP SVEEIEGALR LAVAHIDARN LWVNPDCGLK TRGYAEAEQA LRNMVEAARR VRADLA
|
| |