Gene Ndas_0773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0773 
Symbol 
ID9244617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp949624 
End bp952131 
Gene Length2508 bp 
Protein Length835 aa 
Translation table11 
GC content70% 
IMG OID 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_003678723 
Protein GI297559749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTCA TCGATGTGCT TCCGGCCGAA CCAGAACCCG ACTCCCTCTT CGAGGCGTTC 
GCTTTGTGGG CCGAGGAGCG GGGCCTCACC CTCTACCCGC ACCAGGAGGA GGCCCTCATC
GAGGTCGTCT CCGGGTCCAA CGTCATCCTC AACACCCCCA CCGGCTCGGG CAAGAGCATG
GTGGCCACCG GCGCGCTCTT CGCCGCGCTG GCCCGCGACG AGTGCGCGTT CTACACCGCG
CCCATCAAGG CGCTGGTGTC GGAGAAGTTC TTCGACCTGT GCAAGATCTT CGGCACCGAC
AACGTCGGCA TGATGACCGG CGACGCCAGC GTCAACGCCG ACGCGCCCAT CGTGTGCTGC
ACGGCGGAGG TCCTGGCCCA GATCGCCCTG GCCGAGGGCG CGAACGCCGA CATCAACACG
GTCGTCATGG ACGAGTTCCA CTTCTACGCC GAGCCCGACC GCGGGTGGGC GTGGCAGGTG
CCGCTGCTGG AGATGCCGCA GGCGCAGTTC CTGCTGATGT CGGCCACCCT GGGCGACGTC
AGCCGCTTCG AGGAGGACCT GGAGAAGCGC ACCGGGCGCT CCACCGCCGT GGTGTCCTCG
GCCGAGCGCC CCGTCCCCCT CTACTACGAC TACCGGGTCA CCCCGCTGCA CGAGACGCTG
GAGGAGCTGC TCGGCAGCGG CAACGCCCCC GTGTACATCG TGCACTTCAC CCAGGCGCAG
GCGGTCGAGC GCGCGCAGTC GCTGACCAGC ATCAACATGT GCACCAAGGA GGAGAAGGCG
GCGATCGCCG CGGAGATCGG CAACTTCCGC TTCACCACCA AGTTCGGCCG CAACCTGTCC
CGCTACGTGC GGCACGGCAT CGGCGTGCAC CACGCGGGCA TGCTGCCCAA GTACCGGCGC
CTGGTCGAGC GCCTGGCGCA GTCGGGGCTG CTCAAGGTCA TCTGCGGCAC CGACACCCTC
GGCGTGGGCG TGAACGTGCC CATCCGCACG GTGCTGTTCA CCGCGCTGAG CAAGTACGAC
GGGGTGCGCG TGCGCCGCCT GCGCGCCCGC GAGTTCCACC AGATCGCCGG GCGCGCGGGC
CGGGCCGGGT TCGACACCGT GGGCAACGTG GTGGCCCAGG CCCCCGAGCA CGTCATCGAG
AACGAGAAGG CGCTCGCCAA GGTCGGCGAC GACGCCAAGA AGCGGCGCAA GGTGGTGCGC
AAGAAGGCCC CGGAGGGGTT CGTCTCCTGG GACGAGGCCA CCTTCACCAA GCTGATCGAG
TCCGACCCCG AGCCCCTGAC CTCGCGGTTC AGGGTCAGCA ACGCCATGCT GCTGAGCGTG
ATCGCCCGCC CCGGCGACTG CTTCCCGGCC ATGAAGCACC TGCTCACCGA GAACCACGAC
GACCGCCCCA GGCAGCGCCG CCACATCAGC GAGGCCATCG CCATCTACCG GTCGCTGCTG
GACGGCGGGA TCGTGGAGGC GCTCCCCGAG CCCGACGCGC AGGGGCGCAC CGCGCGGCTG
ACCGTGGACC TCCAGGCCGA CTTCGCGCTC AACCAGCCGC TGTCCACGTT CGCGCTGGCC
GCGCTGGACC TGCTGGACAA GGAGTCGCCC ACGTACCCGC TGGACGTGCT CAGCGTGGTG
GAGTCCACCC TGGACGACCC GCGGCAGATC CTGGGCGCCC AGCTCAACAA GGCGCGCGGC
GAGGCCGTCC AGCAGATGAA GATGGACGGC ATCGAGTACG ACGAGCGCAT GGAGCGGCTG
GAGGAGGTCG ACTACCCCAA GCCGCTGGAG GAGCTGCTCA GCCACGCCTA CGAGGTGTAC
CGGCGCGGCC ACCCGTGGGT GGGCGACCAC CCGCTCCGGC CCAAGACGGT GGCCCGGGAC
ATGTACGAGC GGGCGATGAC CTTCACCGAG TACGTGGGCT TCTACGAACT GGCCCGCTCG
GAGGGGCTCG TGCTGCGCTA CCTGGCCAGC GCGTACAAGG CGCTCAACCA GACGGTGCCC
GACGACGCCA AGACCGAGGA GCTGCGCGAC CTCATCGAGT GGCTGGGCGA GCTGGTCCGC
CAGGTGGACT CCAGCCTGCT GGACGAGTGG GAGCAGCTGA CCAACCCCGA GGCGGAGGTG
CCGGAGGACG CGGCCGCCGC CGAGGAGAAG GTGCGGCCCG TCACCACCAA CGAGCGGGCG
TTCCGGGTGC TGGTGCGCAA CGAGATGTTC CGCCGCGTGG AGCTGGCCGC CCTGCGCCGC
CACGACGAAC TGGGGCGGCT GGACGAGGAC GGGGAGTGGG ACGCCGAGGC CTGGGAGGAG
GCCCTGGACG CCTACTTCGA GGAGCACGAC GCGATCGGGA CCGGGCCGGA CGCGCGCGGC
CCGGCGATGC TGCTCATCGA GCGGGAGCCG GAGCTGTGGC GGGTCCGCCA GATCTTCGCC
GACCCGGCGG GCGACCACGA CTGGGGCATC AGCGCCGAGG TGGACCTGGC CGCGTCCGAC
GCCGAGGGGC GCGCGGTGGT GCACGTGGCG GACGTGGACC GGCTGTAG
 
Protein sequence
MSLIDVLPAE PEPDSLFEAF ALWAEERGLT LYPHQEEALI EVVSGSNVIL NTPTGSGKSM 
VATGALFAAL ARDECAFYTA PIKALVSEKF FDLCKIFGTD NVGMMTGDAS VNADAPIVCC
TAEVLAQIAL AEGANADINT VVMDEFHFYA EPDRGWAWQV PLLEMPQAQF LLMSATLGDV
SRFEEDLEKR TGRSTAVVSS AERPVPLYYD YRVTPLHETL EELLGSGNAP VYIVHFTQAQ
AVERAQSLTS INMCTKEEKA AIAAEIGNFR FTTKFGRNLS RYVRHGIGVH HAGMLPKYRR
LVERLAQSGL LKVICGTDTL GVGVNVPIRT VLFTALSKYD GVRVRRLRAR EFHQIAGRAG
RAGFDTVGNV VAQAPEHVIE NEKALAKVGD DAKKRRKVVR KKAPEGFVSW DEATFTKLIE
SDPEPLTSRF RVSNAMLLSV IARPGDCFPA MKHLLTENHD DRPRQRRHIS EAIAIYRSLL
DGGIVEALPE PDAQGRTARL TVDLQADFAL NQPLSTFALA ALDLLDKESP TYPLDVLSVV
ESTLDDPRQI LGAQLNKARG EAVQQMKMDG IEYDERMERL EEVDYPKPLE ELLSHAYEVY
RRGHPWVGDH PLRPKTVARD MYERAMTFTE YVGFYELARS EGLVLRYLAS AYKALNQTVP
DDAKTEELRD LIEWLGELVR QVDSSLLDEW EQLTNPEAEV PEDAAAAEEK VRPVTTNERA
FRVLVRNEMF RRVELAALRR HDELGRLDED GEWDAEAWEE ALDAYFEEHD AIGTGPDARG
PAMLLIEREP ELWRVRQIFA DPAGDHDWGI SAEVDLAASD AEGRAVVHVA DVDRL