Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0762 |
Symbol | |
ID | 9244604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 936083 |
End bp | 937177 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
Protein accession | YP_003678713 |
Protein GI | 297559739 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCCGGC TGCTCCCCGA CACGGGGCCG GTCAGCCGCG GCGAGGTCGC CTCGGCCCTG GAGCGGCTGG ACGCGCCCCC CGACTACCTG GACCAGGCGG TCGCCCACCT CGCCCGGATC GGCGTGGAGG TCGCGGGCCC CGAGGACACC GGTTCCGAGG ACCCCGGCCC CGTCGCCGAC GGCGGCAGGC GCTCCGGGTC GGACCTGGTC CGCCTCTACC TGCGCGAGAT CGGCCGGGTA CCGCTGCTGA GCGCCGAGCA GGAGGTCGAA CTGGCCAAGG CGGTCGAGGT CGGCCTCTAC GCGCAGCACT GCGCGCCCGT GGAGGGCGTG CGCACCGCCG AGGAGCTGGC CTGCCTGGTC GAGGAGGGGC GGCGGGCCAA GAGGAGTCTG ATCGAGGCCA ACCTGCGCCT GGTGGTCTCC ATCGCCAAGA GGTACATGGG CCGGGGCCTG CTCCTGCTCG ACCTCGTCCA GGAGGGCAAC CTCGGCCTGA TCCGCGCGGT GGAGAAGTTC GACTACGGCA AGGGCTTCAA GTTCTCCACC TACGCGACGT GGTGGATCCG CCAGGCCATC ACGCGGGCGA TCGCCGACCA GGCGCGCACG ATCCGCATCC CCGTGCACAT GGTCGAGACG ATCAACAAGG TCGTCCGGGT CCAGCACCAG CTGCACCAGC AGCTCGGCCG CGAACCCAGC GTCGAGGAGA TCTCCTCGGC CGCCGGGTTC GTCGGCCAGC GCGTCGTGGA GATCCAGCGC ATCGCCCGGG AGCCCGTCTC GCTCCAGTCG CCCATCGGCG AGGAGGAGTC CGACTTCGGC GACTTCATCG AGGACTCCGA CGCGGTCGCC CCCGTCGAGG CGGCGGCCTT CACCGTCCTC CAGGAGCAGC TGGGGGCCAT CCTCGGCGGC CTGTCCGACC GCGAGCGGCG CATCATCCGG CTGCGCTTCG GGATGGCCGA CGGCCACCCG CACACGCTGG AGGAGGTGGG GCGCGAGTTC GGGGTGACCC GTGAGCGCAT CCGCCAGATC GAGGCCAAGA CCCTGGCCAA GCTCCGCCAC CCCTCTCGGG CCGGGAGCCT GCGCGACTTC ATCCGCACCG ACTGA
|
Protein sequence | MVRLLPDTGP VSRGEVASAL ERLDAPPDYL DQAVAHLARI GVEVAGPEDT GSEDPGPVAD GGRRSGSDLV RLYLREIGRV PLLSAEQEVE LAKAVEVGLY AQHCAPVEGV RTAEELACLV EEGRRAKRSL IEANLRLVVS IAKRYMGRGL LLLDLVQEGN LGLIRAVEKF DYGKGFKFST YATWWIRQAI TRAIADQART IRIPVHMVET INKVVRVQHQ LHQQLGREPS VEEISSAAGF VGQRVVEIQR IAREPVSLQS PIGEEESDFG DFIEDSDAVA PVEAAAFTVL QEQLGAILGG LSDRERRIIR LRFGMADGHP HTLEEVGREF GVTRERIRQI EAKTLAKLRH PSRAGSLRDF IRTD
|
| |