Gene Ndas_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0762 
Symbol 
ID9244604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp936083 
End bp937177 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRNA polymerase, sigma 70 subunit, RpoD subfamily 
Protein accessionYP_003678713 
Protein GI297559739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCGGC TGCTCCCCGA CACGGGGCCG GTCAGCCGCG GCGAGGTCGC CTCGGCCCTG 
GAGCGGCTGG ACGCGCCCCC CGACTACCTG GACCAGGCGG TCGCCCACCT CGCCCGGATC
GGCGTGGAGG TCGCGGGCCC CGAGGACACC GGTTCCGAGG ACCCCGGCCC CGTCGCCGAC
GGCGGCAGGC GCTCCGGGTC GGACCTGGTC CGCCTCTACC TGCGCGAGAT CGGCCGGGTA
CCGCTGCTGA GCGCCGAGCA GGAGGTCGAA CTGGCCAAGG CGGTCGAGGT CGGCCTCTAC
GCGCAGCACT GCGCGCCCGT GGAGGGCGTG CGCACCGCCG AGGAGCTGGC CTGCCTGGTC
GAGGAGGGGC GGCGGGCCAA GAGGAGTCTG ATCGAGGCCA ACCTGCGCCT GGTGGTCTCC
ATCGCCAAGA GGTACATGGG CCGGGGCCTG CTCCTGCTCG ACCTCGTCCA GGAGGGCAAC
CTCGGCCTGA TCCGCGCGGT GGAGAAGTTC GACTACGGCA AGGGCTTCAA GTTCTCCACC
TACGCGACGT GGTGGATCCG CCAGGCCATC ACGCGGGCGA TCGCCGACCA GGCGCGCACG
ATCCGCATCC CCGTGCACAT GGTCGAGACG ATCAACAAGG TCGTCCGGGT CCAGCACCAG
CTGCACCAGC AGCTCGGCCG CGAACCCAGC GTCGAGGAGA TCTCCTCGGC CGCCGGGTTC
GTCGGCCAGC GCGTCGTGGA GATCCAGCGC ATCGCCCGGG AGCCCGTCTC GCTCCAGTCG
CCCATCGGCG AGGAGGAGTC CGACTTCGGC GACTTCATCG AGGACTCCGA CGCGGTCGCC
CCCGTCGAGG CGGCGGCCTT CACCGTCCTC CAGGAGCAGC TGGGGGCCAT CCTCGGCGGC
CTGTCCGACC GCGAGCGGCG CATCATCCGG CTGCGCTTCG GGATGGCCGA CGGCCACCCG
CACACGCTGG AGGAGGTGGG GCGCGAGTTC GGGGTGACCC GTGAGCGCAT CCGCCAGATC
GAGGCCAAGA CCCTGGCCAA GCTCCGCCAC CCCTCTCGGG CCGGGAGCCT GCGCGACTTC
ATCCGCACCG ACTGA
 
Protein sequence
MVRLLPDTGP VSRGEVASAL ERLDAPPDYL DQAVAHLARI GVEVAGPEDT GSEDPGPVAD 
GGRRSGSDLV RLYLREIGRV PLLSAEQEVE LAKAVEVGLY AQHCAPVEGV RTAEELACLV
EEGRRAKRSL IEANLRLVVS IAKRYMGRGL LLLDLVQEGN LGLIRAVEKF DYGKGFKFST
YATWWIRQAI TRAIADQART IRIPVHMVET INKVVRVQHQ LHQQLGREPS VEEISSAAGF
VGQRVVEIQR IAREPVSLQS PIGEEESDFG DFIEDSDAVA PVEAAAFTVL QEQLGAILGG
LSDRERRIIR LRFGMADGHP HTLEEVGREF GVTRERIRQI EAKTLAKLRH PSRAGSLRDF
IRTD