Gene Ndas_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0679 
Symbol 
ID9244521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp832627 
End bp833196 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content74% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003678630 
Protein GI297559656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.364709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.103498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGCG ACAACAACAG CGACCCACCC GACCACACGG CGTTCAACGC GCTGTTCGAG 
CGGTACTACG ACGCGGTGTA CGACTACGCC CGCCGCAGGG TCGGCCCCGA TCTGGCCGAC
GACGTGGCCT CGGAGTCCTT CGCGGTCGCC TGGCGACGGC GGACGGGGGT GCCCGAGGGC
CGGGAACTGC CCTGGCTGTA CGCCTGCGCC CGCCGTATCA CCCTCGCCAA GCTGCGCGAG
GTCAGGAAGC GCGGTGAGGT CCCCCCTCCC CCGGAGGAGG CCTGGGGCGG TTCCCAGGAC
GACGCCGAGC GCGTCGTCCG CCGCCAGACG GCCCTGAGCG CCCTGGCCCG GCTCTCCGGC
ACCGACCGCG AGCTCGTGAT GCTCGTGACC TGGGAGGGCC TGAGCAGCCG CGAGGCCGCG
CGCGTGGTGG GCTGCTCACC CGTGACCGCG CGCGGACGGC TGCACCGTGC CCGCAAGCGC
CTCCAGGCGC TCATGGACGA CACCGCACAC CCCGCCGAGG ACAGGAAGGA CGCCTCGTGG
ACGACGTCAC CGCGCTTCGC GCGCTCCTGA
 
Protein sequence
MVRDNNSDPP DHTAFNALFE RYYDAVYDYA RRRVGPDLAD DVASESFAVA WRRRTGVPEG 
RELPWLYACA RRITLAKLRE VRKRGEVPPP PEEAWGGSQD DAERVVRRQT ALSALARLSG
TDRELVMLVT WEGLSSREAA RVVGCSPVTA RGRLHRARKR LQALMDDTAH PAEDRKDASW
TTSPRFARS