| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0634 |
|---|
| Symbol | |
|---|
| ID | 9244476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 780237 |
|---|
| End bp | 781259 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_003678586 |
|---|
| Protein GI | 297559612 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.95317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.661895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCTCCC TCCTCGACGT CCGCGACCTG CGCGTCACCT ACCGCACGGG CGGCGGCGAC
ATCCCCGCCG TGCGCGGCGT GGACCTGTCC CTGGACCCCG GTGACACCCT GGGCCTGGCG
GGGGAGTCGG GCAGCGGCAA GTCCACCGTG GCCCTGGCCC TGCTGCGCCT GCTGCCCGAG
ACCGCGCGCA TCTCCGGCGA GGTCCTGCTG GAGGGCGAGA ACGTCCTGGA CATGCGCTGG
GGCCGCCTGC GCGCGGTCCG CTGGGCGGGC GCCTCCATCG TCTTCCAGGG CGCCATGCAC
TCGCTCAACC CGGTCCGGCG GATCGGACAG CAGATCGCCG AGCCGATGAG CGTGCACGGC
ACGGTCCCCG CGGCGGAGGC GCCCGCACGC GTCGGCGCAC TGCTCGAACA GGTCGGCCTG
CCCGCCTCCC GCGCCCGCGA CTACCCCCAC CAGCTGTCCG GCGGGCAGCG CCAGCGGGCC
ATGATCGCGA TGGCGCTGGC CTGCGAGCCG CGTCTGGTCA TCGCCGACGA GGCCACCACC
GCCCTGGACG TGATGATCCA GGCCCAGATC CTGGCCCTGC TGCGGCGGCT CGTCGCCGAG
CACGGCATCG GCATGCTGAT GATCAGCCAC GACCTGTCGG TCCTGGCCTC GACCTGCGAC
CGGGTCGCGG TCATGTACGC GGGCCGGGTC GTGGAGCAGG GACCGGCGCG GGAGGTCGTG
CACGAACCCG CGCACCCCTA CGCCGGCGCG CTCAGCGCCG CCTTCCCCCG CATCGGCGAC
CCGGCCTCGC GCCTGGCGCC CCGGGGCCTG CCCGGCGACC CGCCCGACCC GGCGGACCCG
CCCTCGGGCT GCGTGTTCCG ACCGCGCTGC GCGGTGGCCG AGACCGTGTG CTCCACGGTC
GACCCGCCCC TGTGGCCGGT GGACCCCGAC ACCGAGGGCG CGTCCACCAG GCAGGCGGCG
TGCGTGCACG TGGGCCCCGC CCGGCCGCTG ACCGCCACCG GGGACGACGG GGGCCGTCCG
TGA
|
|---|
| Protein sequence | MTSLLDVRDL RVTYRTGGGD IPAVRGVDLS LDPGDTLGLA GESGSGKSTV ALALLRLLPE
TARISGEVLL EGENVLDMRW GRLRAVRWAG ASIVFQGAMH SLNPVRRIGQ QIAEPMSVHG
TVPAAEAPAR VGALLEQVGL PASRARDYPH QLSGGQRQRA MIAMALACEP RLVIADEATT
ALDVMIQAQI LALLRRLVAE HGIGMLMISH DLSVLASTCD RVAVMYAGRV VEQGPAREVV
HEPAHPYAGA LSAAFPRIGD PASRLAPRGL PGDPPDPADP PSGCVFRPRC AVAETVCSTV
DPPLWPVDPD TEGASTRQAA CVHVGPARPL TATGDDGGRP
|
|---|
| |