Gene Ndas_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0621 
Symbol 
ID9244463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp761922 
End bp763079 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content78% 
IMG OID 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003678574 
Protein GI297559600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACACA CCGGCTCGGC GACCGCGACC CGGATCGTCG AACTCGAGCT GATCCGGCTG 
CGGCCCCCGG CCGGCGGCCG AGGCCCCGGC GCCGACGGCC CCGTCCTGGT CCGGGTGGCC
GACGGTGACG GCGTGAGCGG CTGGGGAGAA CTGCCGGAGG CCAGCGGAGC CCAGTGGGAC
GCCCTGACCG GCGCCTTCGC CCCCGCCCTG CTCGGCCACT CCTGGCGGCG TCCGACCGAG
GCGGGCGAGG CCTGGGCCGA CCTGTCCTGG GACCCGGCCG TGGCCGGGGC CCTGGACACC
GCGTGCTGGG ACCTGTGGAG CCGCCAGCGC GACACCCCGC TCTCGCATGC CCTGGGCGGA
GAGCGCACCG CGCTCACCGC CGGGGTGACG CTGCCCCGCC AGGTGGCCGT GGAGTCGGTG
GTCACGGAGG TGAACCGCCA GGTGGGGGCG GGGTTCCGGC GGATCCGGCT GGAGATCGCC
CCGGGCTGGG ACGCGGACGT GGTGCGCGCG GTGCAGTCGA GCTTCCCGTT CCTGGTCCTC
CAGGCGGACG CGGGCTGCCG CTACACCGAG TCCCCCGCCG ACCTGGACGC GCTGCGCGTC
CTGGACGGGC TCGGTCTGCT CGCGGTCGAG GACCCCTTCG CCCCGGGCGA TCTGGCCGCG
CACGCCCGGC TGTCCGCCGA ACTGCGCACG CCGGTGGCGC TGGGCCGGTC CCTGGAGTCG
GTGGACGACC TCACCGAGGC GATCCGGGCC GAGGCGGGCG GCGCGGTGAA CGTGGACCCG
ACCCGCATGG GCGGCCTCAC GGCGGCCCGC CGCGCGGTGG ACCGCGCCGT GGACGCTGGC
TGGCGGGTGT GGTGCGGTTC GTCGGCGGTG ACGGGGATCG GCCGCGCCGC GACGGTCGCG
CTGGGCTCGC TGTCGGGGGC CTCGCTGCCG GTGGAGATGC CCGGAGCCGG GAGCCGGGGC
CGCGACCTGA TGCTCCCGCC CGTACGCGCG CACGACGGGG TGGTGCCGGT TCCGCTGACC
GAGAGCGGCC TGGGGCACAC GGTGGACCGC GCGGCGGTGG CCGAGCGCAC CGCCCGGGCC
CTGGTCGTGG ACGCCGACGG CCCGCGCGAG GCCCGCGTGG AGCGCGGGCG CGCCAACGGC
GCCCGACGGC GGCGCTGA
 
Protein sequence
MAHTGSATAT RIVELELIRL RPPAGGRGPG ADGPVLVRVA DGDGVSGWGE LPEASGAQWD 
ALTGAFAPAL LGHSWRRPTE AGEAWADLSW DPAVAGALDT ACWDLWSRQR DTPLSHALGG
ERTALTAGVT LPRQVAVESV VTEVNRQVGA GFRRIRLEIA PGWDADVVRA VQSSFPFLVL
QADAGCRYTE SPADLDALRV LDGLGLLAVE DPFAPGDLAA HARLSAELRT PVALGRSLES
VDDLTEAIRA EAGGAVNVDP TRMGGLTAAR RAVDRAVDAG WRVWCGSSAV TGIGRAATVA
LGSLSGASLP VEMPGAGSRG RDLMLPPVRA HDGVVPVPLT ESGLGHTVDR AAVAERTARA
LVVDADGPRE ARVERGRANG ARRRR