| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0615 |
|---|
| Symbol | |
|---|
| ID | 9244457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 753335 |
|---|
| End bp | 754810 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family with aminotransferase domain |
|---|
| Protein accession | YP_003678568 |
|---|
| Protein GI | 297559594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.736452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCTT CCCGGAGTTC CGCCGAACTC GCCGACCTCC TCGGCGCCTG GCCCCGGGGC
GGCGGGCCCC TCTACCGGCG CCTCGCCGAC ACCCTGCGCC AGCTGGTCGA CCAGGGCAGC
CTCACCCCCG GTGAGCGCCT GCCCTCCGAG CGCGCCCTCG CCGCCAGCCT CCGGGTGAGC
CGCACCACCG TGGTCTCCGC CTACGACGCC CTGCGCGCGG ACGGCATCCT CGACAGCAGG
CAGGGCAGCG GCACCCGCGT CAGCAGCCGG GTCGCGCCCG TGCGCTCGGA CGGCTGGACC
GCCAACGGCA CGGGCAACCC CATGTACCGC AACCTCTTCC AGCACGAGGA GGGACTCATC
TCGGCCGCCT GCCTGACCAC CCCCGCGCTC CCCGGCGTGG AGGAGGCCAT CCGCCGGGTC
GTGGCCGAGG ACCTGCCCGC GCTCATGGCC GAGGGCAGCT ACCACCCCAG CGGCCTGCCC
GCGCTGCGCC GGGCCGTCGC CGACCACTAC ACCGCCCGGG GCCTGCCCAC CACCGCCGAC
CAGATCGTCG TCACCACCGG CGCCCACCAG GCCGTCAACC TGGTCGCCCA GCTCTACCTG
CGCAACGGCT CGCCCGTCGT GGTGGAGGAC CCCAGCTTCG CGGGCTGCCT GGACCTGATG
GGGGACCGGG GCGCACGCTT CCTGCCCGTG CCCCTGGACG AACAGGGTCT GGACGCCAAC
GGCGTGCGCC GCGCCGTGGC CGAGCACGCG CCCCACCTCG TCTACACGAT GCCCTCGTAC
CACAACCCCA CCGGCACGAT GATGTCCGCG GCGCGCCGCC GCGAGCTGGG TGAGCTGTCC
GCCCGTCACG GCGTTCCGGT GCTGGAGGAC CACGCCTACA CCGGCCTGCG CGCCCCCGAC
GAGCCCCCGC CGCTGGCCGC GTTCGCCCCG CGCGGGGCCG AGGTCATCAC CGTGGAGTCG
CTGTCCAAGG TCGGCTGGGC CGGGCTCCGG CTGGGCTGGC TTCGCGCGCC CGCCGAGATG
GCCCTGCGCC TGAGCCGCCG CAAGGTCCTC GCCGACCTGG CCAGCCCCCT GCTCGACCAG
GCGGTGACCG TGCGCCTCCT GGAGCGCTAC GACGAGCTGT CCCGGCAGCG CTCCGAGCTG
ATGCGCGAGG CCCTCGACCA CATGGAGGAG CTGCTGCGCG GTGCCCTGCC CTCCTGGGAG
TGGCGGCGCC CCGACGGAGG GGCGGCGCTG TGGGTGCGCC TGCCCGGGGT GGAGGCCCGC
GCCTACGTAC AGGTCGCGCT CTGCCACGAC GTGGAGCTGG TCCCTGGCTC GGTGATGTCG
GCCTCCGGAG GGGAGCGCCA CGCCGAGTGG TTCCGGCTGC CCTTCGCCTA CGACGCCCCC
ACCCGGGAGG AGCTGGTCTG GCGGCTGGCG CGGGCCTGGC GCGAACTCGA CCGGCACGGG
CCGGTGGAGG CCGATCCGGT CCGCCTCGTG GTCTGA
|
|---|
| Protein sequence | MDSSRSSAEL ADLLGAWPRG GGPLYRRLAD TLRQLVDQGS LTPGERLPSE RALAASLRVS
RTTVVSAYDA LRADGILDSR QGSGTRVSSR VAPVRSDGWT ANGTGNPMYR NLFQHEEGLI
SAACLTTPAL PGVEEAIRRV VAEDLPALMA EGSYHPSGLP ALRRAVADHY TARGLPTTAD
QIVVTTGAHQ AVNLVAQLYL RNGSPVVVED PSFAGCLDLM GDRGARFLPV PLDEQGLDAN
GVRRAVAEHA PHLVYTMPSY HNPTGTMMSA ARRRELGELS ARHGVPVLED HAYTGLRAPD
EPPPLAAFAP RGAEVITVES LSKVGWAGLR LGWLRAPAEM ALRLSRRKVL ADLASPLLDQ
AVTVRLLERY DELSRQRSEL MREALDHMEE LLRGALPSWE WRRPDGGAAL WVRLPGVEAR
AYVQVALCHD VELVPGSVMS ASGGERHAEW FRLPFAYDAP TREELVWRLA RAWRELDRHG
PVEADPVRLV V
|
|---|
| |