Gene Ndas_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0570 
Symbol 
ID9244412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp707059 
End bp707877 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content74% 
IMG OID 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_003678523 
Protein GI297559549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.666959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCA TCAAGGTCAG TGACCCCGCG GACCCGCGCC TGGCCGACTA CACCCGCCTG 
CGCGACGTGA ACCTGCGCCG CCACCTGGAG GCCGAGCACG GGCTGTTCAT GGCCGAGGGC
GACAAGGTCA TCCGCCGGGC CGCCGCGGCC GGTTTCGAAC CCCGCAGCTT CCTGCTCACC
GAACGCCGGG CCGAGGCGCT CGACGACGTG GTCGCCGCCT CCTCCGCGCC GCTGTACGTG
GTCGGGGAGG ACACCGCCGA GAAGCTCGTC GGCTTCGACC TGCACCGCGG CGCGCTGGCC
GCCTTCCACC GCCGCGCCCT GCCCCCACTC GACGACGTCC TGGCCGGGGC GCGCACCATC
GTGGTCCTGG AGGACCTGGT GGACCACACC AACGTGGGCG CCATCTTCCG CAGCGCCGCC
GGTCTGGGCG TGGACGCGAT CGTGCTCGCG CCCCGCTGCG CCGACCCCCT GTACCGGCGC
GCGGTCAAGG TGTCCATGGG CGCGGTCTTC ACCCTGCCCC ACACCCGCCT GGACGACTGG
TACGGCGGTC TGGACACCCT GCGCGCGGCC GGGTTCCACC TCATGGCGCT CACACCGGGG
GAGGGCTCCC TGCCCCTGCG CGACGCCATG GCCGCCCTCG CGCCGGGCGA CCGGGTCGGA
CTCCTGCTCG GCACCGAGGG AGACGGGCTC TCCTCCCGCT GGCTGGAGCG GGCCACCGCC
CGGGTGCACA TCCCCATGGC CGACCGCGAC GTCGACTCCC TCAACGTCAC CGCCGCGGCC
GCCATCGCCT GCTACGAGCT CACCCGCGCC ACCGGCTGA
 
Protein sequence
MDVIKVSDPA DPRLADYTRL RDVNLRRHLE AEHGLFMAEG DKVIRRAAAA GFEPRSFLLT 
ERRAEALDDV VAASSAPLYV VGEDTAEKLV GFDLHRGALA AFHRRALPPL DDVLAGARTI
VVLEDLVDHT NVGAIFRSAA GLGVDAIVLA PRCADPLYRR AVKVSMGAVF TLPHTRLDDW
YGGLDTLRAA GFHLMALTPG EGSLPLRDAM AALAPGDRVG LLLGTEGDGL SSRWLERATA
RVHIPMADRD VDSLNVTAAA AIACYELTRA TG