Gene Ndas_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0548 
Symbol 
ID9244389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp678536 
End bp679273 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content73% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003678501 
Protein GI297559527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CCGAACAGCG TGTGGCGCTG GTGACCGGCG GATCGCGCGG TATCGGACGG 
GCGGTGGCCG AACGCCTCGC CGCCGACGGC CAGGACGTCG CGATCGTGTA CGCGGGCGAC
ACCCCCGCGG CGGAGGCCGC CGTCGCCGCG GTCACCGACG CGGGCGGCGG CGCCGTCGCG
ATCCGGGCCG ACGTCGCCGA CGAGGACGCC GTGCGCGCGG CCTTCGACGC GGTCGAGGAG
CGGTTCGGCG GCGTGGACGT CGTGGTCAAC TCCGCCGGGA TCATGCTCCT GGACACCGTG
GCCGATTTCG ATCTGGCCGA CCTCGACCGC ATGCACCGGA CCAACATCCG TGGCACCTTC
GTGGTCAACC AGCAGGCGGC CAGGAGGGTC CGCCGGGGCG GGGCGATCGT CAACGTCTCC
ACCTCGGTCG GCAAGCTCGC CCTGCCGACC TACGCGGCCT ACGCCGCCTC CAAGGGCGCC
GTGGACGCGA TCAGCCCGGT ACTGGCCAAG GAGCTGCGGG GCCGGGACGT GACGGTGAAC
GCCGTCGCCC CCGGGCCCAC CGCCACGGAC CTGTTCCTGG CGGACAAGAG CGAGGAGCAG
GTGGAGCGGC TGGCCGGGAT GAACCCCTTC GGGCACCTCG GCGCCCCCGA GGACATCGCC
GAGGTGGTCT CCTTCCTCGC CGGGCCCGGC CGCTGGGTCA ACGGCCAGAT CCTCTACGCC
AACGGCGGCA TGGTCTGA
 
Protein sequence
MSSTEQRVAL VTGGSRGIGR AVAERLAADG QDVAIVYAGD TPAAEAAVAA VTDAGGGAVA 
IRADVADEDA VRAAFDAVEE RFGGVDVVVN SAGIMLLDTV ADFDLADLDR MHRTNIRGTF
VVNQQAARRV RRGGAIVNVS TSVGKLALPT YAAYAASKGA VDAISPVLAK ELRGRDVTVN
AVAPGPTATD LFLADKSEEQ VERLAGMNPF GHLGAPEDIA EVVSFLAGPG RWVNGQILYA
NGGMV