Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0548 |
Symbol | |
ID | 9244389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 678536 |
End bp | 679273 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003678501 |
Protein GI | 297559527 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCA CCGAACAGCG TGTGGCGCTG GTGACCGGCG GATCGCGCGG TATCGGACGG GCGGTGGCCG AACGCCTCGC CGCCGACGGC CAGGACGTCG CGATCGTGTA CGCGGGCGAC ACCCCCGCGG CGGAGGCCGC CGTCGCCGCG GTCACCGACG CGGGCGGCGG CGCCGTCGCG ATCCGGGCCG ACGTCGCCGA CGAGGACGCC GTGCGCGCGG CCTTCGACGC GGTCGAGGAG CGGTTCGGCG GCGTGGACGT CGTGGTCAAC TCCGCCGGGA TCATGCTCCT GGACACCGTG GCCGATTTCG ATCTGGCCGA CCTCGACCGC ATGCACCGGA CCAACATCCG TGGCACCTTC GTGGTCAACC AGCAGGCGGC CAGGAGGGTC CGCCGGGGCG GGGCGATCGT CAACGTCTCC ACCTCGGTCG GCAAGCTCGC CCTGCCGACC TACGCGGCCT ACGCCGCCTC CAAGGGCGCC GTGGACGCGA TCAGCCCGGT ACTGGCCAAG GAGCTGCGGG GCCGGGACGT GACGGTGAAC GCCGTCGCCC CCGGGCCCAC CGCCACGGAC CTGTTCCTGG CGGACAAGAG CGAGGAGCAG GTGGAGCGGC TGGCCGGGAT GAACCCCTTC GGGCACCTCG GCGCCCCCGA GGACATCGCC GAGGTGGTCT CCTTCCTCGC CGGGCCCGGC CGCTGGGTCA ACGGCCAGAT CCTCTACGCC AACGGCGGCA TGGTCTGA
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Protein sequence | MSSTEQRVAL VTGGSRGIGR AVAERLAADG QDVAIVYAGD TPAAEAAVAA VTDAGGGAVA IRADVADEDA VRAAFDAVEE RFGGVDVVVN SAGIMLLDTV ADFDLADLDR MHRTNIRGTF VVNQQAARRV RRGGAIVNVS TSVGKLALPT YAAYAASKGA VDAISPVLAK ELRGRDVTVN AVAPGPTATD LFLADKSEEQ VERLAGMNPF GHLGAPEDIA EVVSFLAGPG RWVNGQILYA NGGMV
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