Gene Ndas_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0537 
Symbol 
ID9244378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp659816 
End bp660871 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content74% 
IMG OID 
ProductPectate lyase/Amb allergen 
Protein accessionYP_003678490 
Protein GI297559516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCTC ACCCGATCGC CGCCGCGGCC GCGGCGGCGC TGCTGTGCGC TGCCCTCACC 
TCGTGTTCCC CGGAAGGGGA GGAGGCCGCG ACACAGCCGC AGACCGGTGC CGCCGCCGAA 
CCGGACACGG AGGCCGACGA GTCCGGGTCC CCGGCGGAGC AGACCCCGGA CGAGACTCCG 
TCGGAGACAC CGGAGGGGGA GCGGGGCGGG CCGGTCGGCT GGGCGGGCGA GCCGCTGGAG 
CGCGACGGTG AGGAGTACCC CGGCGCGGTC GGCGGGGCGG AGGGGGAGAC CGTCACCGCC 
TCCGACGCCG GGGAGCTGGC CGACCACCTG TCCGCCGAGG AGCCGCTCAC CGTCGAGGTC 
ACCGGAGCGA TCGACCTGGA CGGGACGGTG GAGGTCGGCT CGGACAAGAC CCTGGTGGGT 
GTCGAGGGCG GCGCCGAGCT CACCGGCGGG CGGCTGGTGG TCGACGGAGC CAGCAACGTC 
ATCCTGTCCA ACCTGCGGGT GGAGGCCGAC GGGACCGCGC TGTCCGTGCG CGGTGGCGCC 
CACCACGTGT GGGTGGACGG CTCCACGTTC TCCGGCGGCG GGGACGCCCC CCTCGTCTCG 
GTGACCGGCG GCGCCGACCA CGTCACCCTG TCCTGGAACC ACTTCGCCGA CGCCGAGTCG 
GCGCTCGCCG TCGGCGGCGG GGAGGAGGAG CCGGGGGCGC TGCGGGTCAC CGTGCACCAC 
AACTACTTCG ACGGGACGGC GGGACGCCAC CCCAGGGCGC GGTTCGCCGA GCACGTGCAC 
GTGTTCAACA ACTACTTCCG GGCCAACGAG GAGTACGGGG TGGAGTCGGC CGACGACTCC 
AACGTCCTGG TGGAGGGCAA CTACTTCGAG GGCACCCGGC TCTCGGTGGC CACCTCGGAG 
GAGGAGCCCG GCAACGTGGT CACCCGCGAC AACCTGCTCG TGGACTCCGC GCAGCCCGAC 
CTGCTCGGCG AGGTGGCCGA CCCTCCCTAC GCCTACGAGA TGGACGACAC CGCCCGCGTC 
CCCGACGTGG TCTCGGCGGA GGCCGGGGTC AGCTGA
 
Protein sequence
MRPHPIAAAA AAALLCAALT SCSPEGEEAA TQPQTGAAAE PDTEADESGS PAEQTPDETP 
SETPEGERGG PVGWAGEPLE RDGEEYPGAV GGAEGETVTA SDAGELADHL SAEEPLTVEV 
TGAIDLDGTV EVGSDKTLVG VEGGAELTGG RLVVDGASNV ILSNLRVEAD GTALSVRGGA 
HHVWVDGSTF SGGGDAPLVS VTGGADHVTL SWNHFADAES ALAVGGGEEE PGALRVTVHH 
NYFDGTAGRH PRARFAEHVH VFNNYFRANE EYGVESADDS NVLVEGNYFE GTRLSVATSE 
EEPGNVVTRD NLLVDSAQPD LLGEVADPPY AYEMDDTARV PDVVSAEAGV S