Gene Ndas_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0534 
Symbol 
ID9244375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp654447 
End bp655358 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003678487 
Protein GI297559513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.854176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA TCGAGAAGAG CACGGGGCAC GGCAAGGCGC CGACCATGCC CCCGGCGCCC 
AACCGGTTCA AGGACGTTGT ACGCCAGCTC ATGGGTACCC GGCGGGTCAT CGTCGGTTTC
GTCATGCTCG TGCTGCTGGC GGTCTTCGCC TTCGTCGGCC CTCACATCAG CGGCTGGGAG
GTGGGTCAGC GTGACTTCGG GGCCACACTC GAGGCGCCTT CCGCCGAACA CTGGATGGGG
ACCAACCGCA CCGGCCAGGA CATCTTCACC CAGGCCACCG CCGGCCTGCA GAAGTCGCTT
CTCATCGGAC TGCTGGTCGC CGTGGCCTCC ACGTGTATGG CCGCCCTCGT CGGCGCATTC
GCCGGTTACT TCGGCGGTGT GACGGACCGC GCCCTGATGT GGGTCGCCGA CCTGGCCCTG
GTTCTGCCCA ACTTCGTCAT CCTGGCGATC CTGTCCAGGC ACTTCGTCGG CCAAGGCGGC
TGGTTCGTCC TGGTCATCCT CCTGGCGGCG TTCAGCTGGA TGGTCACCTC CAAAATGGTC
CGTGGTCTGA GCATCTCCCT GCGCGAACGC GAGTACATCC ACGCGGCGCG GTTCATGGGA
GTGCCCCCGT ACAAGATCAT CCTGCGCCAC ATCCTGCCCA ACATGTCGTC CCTGCTCATC
GCGGACGCCA CGATCACGGT CAGCACCGCC ATCATCGGCG AGACCGCCCT GAGCTACTTC
GGCCTGGGCG TGCAGTCGCC CGACATCAGC CTCGGCATGG TCATCGCCGA AGGGTCGTCC
TTCTCCACCA CCGCTCCGTG GATGTTCGCG TTCCCCACGG TCCTGTTGGT GCTGATGGTG
CTCGCCGTCA ACATGATCGG GGACGGGCTG CGCGACGCCC TCGACCCGCA GTCCAAGTCG
CGCCGGTCCT AG
 
Protein sequence
MSTIEKSTGH GKAPTMPPAP NRFKDVVRQL MGTRRVIVGF VMLVLLAVFA FVGPHISGWE 
VGQRDFGATL EAPSAEHWMG TNRTGQDIFT QATAGLQKSL LIGLLVAVAS TCMAALVGAF
AGYFGGVTDR ALMWVADLAL VLPNFVILAI LSRHFVGQGG WFVLVILLAA FSWMVTSKMV
RGLSISLRER EYIHAARFMG VPPYKIILRH ILPNMSSLLI ADATITVSTA IIGETALSYF
GLGVQSPDIS LGMVIAEGSS FSTTAPWMFA FPTVLLVLMV LAVNMIGDGL RDALDPQSKS
RRS