| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0520 |
|---|
| Symbol | |
|---|
| ID | 9244361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 636013 |
|---|
| End bp | 636870 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | helix-turn-helix domain protein |
|---|
| Protein accession | YP_003678473 |
|---|
| Protein GI | 297559499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGCA TGCTGATCGG GCACGAGCTG CGCCAGCTTC GCGAAGCGCG TGGTATCAGC
CGAGAGGACG CCGGGAACAA GATTCGGGCA TCGGCGTCGA AGATCAGCCG TATGGAACTC
GGCCGGGTCG GTTTCAAGCT GCGCGATATC GAGGACCTCC TCAAGATGTA CGGGGTCTCC
GACCGCAAGA GGATCAAGGA AATCCTCGAA GTCGCGCGCG AATCCAACAA GCCCGGTTGG
TGGAAGGAGT ACGGGGAGTC ACTGCACAAG TGGTTCATCC GCTACGTCGG CTTCGAGGAG
GCCGCCGACC ACATCCGCAT CTACGAGTCC CAGTTCGTCC CGGGGCTGCT CCAGACCGAG
GAGTACGCGC GGGCGGTCAT CTCCGGCGGA GTGGAGACCG ACGAGGTCAC CGAGCAGCGC
GTCGACGCCA GACTCAAGAG ACAGCGGCGC CTGCGCACCG ACACGAGCAT GCGCATGTGG
GTGATCCTCG ACGAGGCGGC GGTCCGCAGG CCCATCGGCG GGCCGGAGGC CGGGCGCGAG
ATCATGCGCG GTCAGCTGGA GTGGCTCATC CAGCTCAGCA AGGAGTACGA CAACATCACC
CTCCAGATCG TCCCCTTCGC GGTGGGCGCG CACGCGGCCG AGGCGGGATC GTTCACACTC
TTGCGCTACT CGGAGTTCGA GCTCGCGGAC ATGGTCTACC TGGAGCAGCT CACCGACGGC
GAGATCATCG ACCGCAGGCC GGTGGTGGAG GCCTACACCA AGGCCATGAC CCGGCTCAGC
GTCGCCGCGG CCACGCCGGA CGAGACGCTG GAACTGCTGG AGCAGATGCT GGAGGACCTG
GACAAGGAAG TCGGCTGA
|
|---|
| Protein sequence | MRRMLIGHEL RQLREARGIS REDAGNKIRA SASKISRMEL GRVGFKLRDI EDLLKMYGVS
DRKRIKEILE VARESNKPGW WKEYGESLHK WFIRYVGFEE AADHIRIYES QFVPGLLQTE
EYARAVISGG VETDEVTEQR VDARLKRQRR LRTDTSMRMW VILDEAAVRR PIGGPEAGRE
IMRGQLEWLI QLSKEYDNIT LQIVPFAVGA HAAEAGSFTL LRYSEFELAD MVYLEQLTDG
EIIDRRPVVE AYTKAMTRLS VAAATPDETL ELLEQMLEDL DKEVG
|
|---|
| |