Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0505 |
Symbol | |
ID | 9244346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 622586 |
End bp | 623266 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003678458 |
Protein GI | 297559484 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCGCC TGGAGGGCGT CTCCCACTCC TACGACGACC GCGCCGTGCT GCGCGACGTC ACCCTCGACC TCGCCGAGCA CCGCATCGGC GTGATCGGGG CGAACGGATC GGGCAAGTCC ACGCTCGCCC GCACCCTCAA CGGCCTCGTC GTCCCCGACG AGGGCCGTGT GACGCTGGGG GAGTGGGACA CCCGGCGCCA CGCCAAGCAG ATCCGGCGCA GGGTCGGCTT CGTCTTCTCC GACGCCGCCA ACCAGATCAT CATGCCCACC GTCGCCGAGG ACGTGGAGAT CGGCCTGCGC TCCCTGCGTC TGGGCCGCGA GGAGACCGCC CGCCGGGTGG AGGCGGCCCT GGTCCGCTAC GGGCTCGACG GCCACCGCGA CCACCCCGGC CACCTGCTCT CGGGTGGGCA GAAGCAGCTC CTGGCCCTGG CCTCGGTACT GGTCACCGAG CCCGAGGTGC TGGTCTGCGA CGAGCCCACC ACCCTGCTCG ACCTGCGCAA CACCCGCATC GTGCACCGGA CCCTGGACGG CCTGGACCAG CAGGTCGTCC TGTTCACCCA CGACCTCGAC CTCCTCGACG GCTTCGACCG GGTCCTGGTC ATGGACGCGG GCCGGGTGGT CTTCGACGGT GTTCCCGACG ACGCCGTGCC CCACTACACC AAGCTCATGG ACGAGCGGTG A
|
Protein sequence | MLRLEGVSHS YDDRAVLRDV TLDLAEHRIG VIGANGSGKS TLARTLNGLV VPDEGRVTLG EWDTRRHAKQ IRRRVGFVFS DAANQIIMPT VAEDVEIGLR SLRLGREETA RRVEAALVRY GLDGHRDHPG HLLSGGQKQL LALASVLVTE PEVLVCDEPT TLLDLRNTRI VHRTLDGLDQ QVVLFTHDLD LLDGFDRVLV MDAGRVVFDG VPDDAVPHYT KLMDER
|
| |