| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0487 |
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| Symbol | |
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| ID | 9244328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 585245 |
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| End bp | 587023 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003678440 |
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| Protein GI | 297559466 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.183361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGACC TGAGCCGCAG GCGCCTGCTC CGGACGATCG GCCTCGGCGC GGCGGGCGTC
GCCGGCGCCG GAGTGCTGTC CTCCTGCGCG GGCGGCGACA ACGCCGAGAG CGGCGCCACG
CAGTTCACCG GCGTCTTCGA CTTCGACCTG GCCGCCCAGA CGCGCAACGT CGCCGTGGAG
GACGGCGCGC TGCTGATGAA CTCCGTGTAC GCCGACCTCT TCCTGCCCGC GGGCGCGTTC
TACAACTGGG AGACCCACGA GTGGGACTAC CTGCTCCTGG AGAACAGCGC CTGGGAGGGC
GACGACCTCG TCGTGACCCT GCGCCCGGGC CTGAAGTGGA GCGACGGCAC CGACCTGACC
GCCGAGGACC TGCACCAGAA CTACGCCATC CGGGTCCTGG AGGCGCCCGC GTGGTCGGTG
GGCTTCCCGC AGATCACCGA GTTGGAGCGG CTGGACGACC TCAGCGTCCG CGCGCGCTTC
GGCAACCCCT TCCCCGGCAT CGAGCTCCAG GTCGTCAAGC ACCGGATCTT CTCCAAGTCG
ACCTACGGCG ACTTCGGGGA GCGCGCGATC ACGATGGTGG CCGACGGCGT CCGCCAGGGC
GACGACGAGC ACACCGAGTT CAACGCCGAG TTCATCGAGT TCAACCCCGA GGAGATCATC
ACCAGCGGGC CCTACACCTT CGACCGGGCC CAGATGTCCG ACGCGCGGAT CACCCTGGTG
CGCGAGAGCA CCGGCTACCG GGGCGAGGAG GTGAACTTCG AGGAGGTGGT CGTCCACAAG
GGTGACAACC GCCAGGCCTC CCTGCTCATC CAGCAGGGCG AGGTCGACTA CTCGACCCTG
GCCACCTCCG CCGCCGACCA GCAGGCGTTC CGCGGCGTCG AGGGGTTCCG GTGGATCGAG
CACCCCGGCT ACGACGGCTG CGGACTGATG TTCAACTACG CGGCCAAGCC CGAGCTCAAG
GACGTTCGGG TGCGCAAGGC GCTCAAGCAC CTGCTCGACA GCGACCAGAT CGGCCAGGTG
GCCCGGGGCG AGGCCTACGA CCGGGTGCGG TACTACTCCG GGCTGGTCGA CCTCCAGACC
GAGCAGATCT TCACCCCCGA GGAGCTCGCG GAGTTCGCCG CCTACGACCA CGACCCGGAC
CGGGCCACCG AACTGCTGGA GGAGGCGGGC TGGACCAAGG AGGGCGGGGT CTGGCACACC
GCCGAGGGTC AGGAGGCCAG CTACGAGATC ATCGGCGTCG CGGGCTGGGG CGACTTCGAG
CTGACCGCCA CCCAGGTGGA GGAGGCCTGG AACGCCTTCG GTATCAAGAC GACCGCGCGC
AACGTGCCCG CGGACAACCC GTGGGGCATC TGGGCCGCAG GTGACTTCGA GGTGGCCGTG
CGCCACTGGG GCAACCCGGA GATCCCGCAG TACTGGGGCG CCTTCCAGAT GAACTTCCTG
GTGGAGAACG CCCGCACCGG CGAGACCCCG GGGCAGGACT TCGACCTGAA GGTGGACAGC
CCCAGCCGGG GCGAGGTGGA CCTGGAGGCG CTGGTCGAGG TCGCCAAGAC CGCGCAGACC
GAGGAGGAGC AGACCGAGGC CCTCAAGACG ATGGCGATCG TCTTCAACGA GCTGCTGCCG
CGCATCCCGA TCTGGACCTA CAAGTACCTG GCCCCGGCCC TGGAGGGCGC GCGGGTGGAG
TCCTTCCCCG AGGACCACCC CGCCGCCCAG AACCAGATCT ACCGGGACAA CCACATCATC
CTGTCGCTGA TGCAGGGCGG CCTGGAGGCT GCCGGGTAG
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| Protein sequence | MRDLSRRRLL RTIGLGAAGV AGAGVLSSCA GGDNAESGAT QFTGVFDFDL AAQTRNVAVE
DGALLMNSVY ADLFLPAGAF YNWETHEWDY LLLENSAWEG DDLVVTLRPG LKWSDGTDLT
AEDLHQNYAI RVLEAPAWSV GFPQITELER LDDLSVRARF GNPFPGIELQ VVKHRIFSKS
TYGDFGERAI TMVADGVRQG DDEHTEFNAE FIEFNPEEII TSGPYTFDRA QMSDARITLV
RESTGYRGEE VNFEEVVVHK GDNRQASLLI QQGEVDYSTL ATSAADQQAF RGVEGFRWIE
HPGYDGCGLM FNYAAKPELK DVRVRKALKH LLDSDQIGQV ARGEAYDRVR YYSGLVDLQT
EQIFTPEELA EFAAYDHDPD RATELLEEAG WTKEGGVWHT AEGQEASYEI IGVAGWGDFE
LTATQVEEAW NAFGIKTTAR NVPADNPWGI WAAGDFEVAV RHWGNPEIPQ YWGAFQMNFL
VENARTGETP GQDFDLKVDS PSRGEVDLEA LVEVAKTAQT EEEQTEALKT MAIVFNELLP
RIPIWTYKYL APALEGARVE SFPEDHPAAQ NQIYRDNHII LSLMQGGLEA AG
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