| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0468 |
|---|
| Symbol | |
|---|
| ID | 9244307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 564921 |
|---|
| End bp | 565541 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1707 |
|---|
| Protein accession | YP_003678421 |
|---|
| Protein GI | 297559447 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.531836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGA TGCGTGTCTC CGACGCGGAG AGGGACCAGG TGGCGGAGGT CCTGCGGGAG
GCGGCGGCAC AGGGGCGCAT CACCCTCGAC GAACTCGACG AACGGCTCAA CGCCGTCTAC
GCGGCCAAGA CCTACGCCGA CCTCGAACCG GTCACCGCCG ACCTGCCGAC GGGCGCCGAG
ACGCTGCCGG GCGCCGTCGC GCGGCCGGTG GAGGGCGTCC TCCCGGAGCG CCACGACGGC
GGCGACGCCC TCGTCATCCG CTCCCAGGGC GGTGGCCCCG TCATCCGCAG GGGCGCGTGG
CAGGTGCCGC GCCGCGTCGA GGTGCACAAC AAGTACGGCC TCACCCGGCT CGACTTCCGC
GAGGCCTCCC TGACCAGCGC CGTCGTCGAG GTCCACGTGG ACGCCTCCTG GGGGAACGGC
ACCGTGATCC TGCCCGAGGG CGCCACCGCC GAGGTGGAGG CGGACGCCTC CTGGTTCGGC
ACACTGCGCA ACAGCACCGA CTCCCTGCGC CGGGCGTCCG CCCCGCACTT CGTCATCACC
GGTTCCTGCC AGGGCGGCTC CCTGACGGTT CGGTACAAGC GGCCCTTCTC CTGGGGCGGC
CTGGCGGGTC TGGGGAGCTG A
|
|---|
| Protein sequence | MSRMRVSDAE RDQVAEVLRE AAAQGRITLD ELDERLNAVY AAKTYADLEP VTADLPTGAE
TLPGAVARPV EGVLPERHDG GDALVIRSQG GGPVIRRGAW QVPRRVEVHN KYGLTRLDFR
EASLTSAVVE VHVDASWGNG TVILPEGATA EVEADASWFG TLRNSTDSLR RASAPHFVIT
GSCQGGSLTV RYKRPFSWGG LAGLGS
|
|---|
| |