| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0410 |
|---|
| Symbol | |
|---|
| ID | 9244249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 502231 |
|---|
| End bp | 503478 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | alanine racemase domain protein |
|---|
| Protein accession | YP_003678364 |
|---|
| Protein GI | 297559390 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.844153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTGGC ATGCTCAGGA CATGACAAGT CTGCGCGAAA CGTACGAGTC CGCCACACGC
GGACTCGAAG CCCCCTTCGC CCTCGTCGAC CTCGCCGCCC TGCGCTCCAA CGCGGCCGAC
CTGACCCGCC GCGCCCACGG CAGGCCCATC CGGATCGCCA GCAAGTCCGT GCGCAGCCGC
GAACTGCTGC GCACCGTCCT CGCCCTGCCC GGCTACGCGG GCGTCATGGC CTTCACCCTG
CCCGAGGCCC TCTGGCTGGC CACCGGCGAC CGCCCCCTCA GCGACGACGT CCTCGTCGCC
TACCCCACCG TCGACCGCCA GGCCCTGGCC AGGCTCGTGC GCGACCCCCG CGCCGCCCGC
GCGATCACCC TGATGGTGGA CGACACCGCG CACCTGGACC TGATCGGCGC CGCCGTCGCC
GACGCCGCCG AATCCCGCGG CCCCGACGCC CCGCCGGTCC GGGTGTGCCT GGACGTCGAC
ACCAGCTGGC AGCCCGTGGG ACCGCGCCTG CGCGTGGGCA CCTACCGCTC CCCCGTGCGC
ACCCCGGCCC AGGCCGCCGC GTTCGCCCGC GCGGTCGCGG CCCGCCCCGG ACTGGAGCTG
GACGGGATCA TGGCCTACGA GGGCCAGATC GCCGGGGTGG GCGACGCCCC GCCCGGCAGA
CCGCTCTACG GACGCCTCCT GCGCGCCGTC CAGCGCCGCT CGGCCGTGGA GCTGGCCAAG
CGCCGCGCCG CCATCGTCCA CGCCGTCAGG GAGGTCGCCG ACCTGCGCTT CGTCAACGGC
GGCGGCACCG GCAGCCTGCA CACCACCGGC CGGGAGAGGG CCGTGACCGA GCTGGCGGCG
GGCTCGGGGC TCTACCACCC GCACCTGTTC GACCACTACC GCTCCTTCGG CGGACGCCCC
GCCGCCCTGT TCGCGCTCCC CGTCGTGCGC CGGCCCGGAC CGGGCGTGGC CACCGCCCTG
GGCGGCGGCT ACCCCGCCTC GGGCCCCGTG AACGCCCACC GCGCCCCGCT CCCCCACCTG
CCCGCCGGGC TCTCCTACAG CGTCAACGAG GGCGCGGGCG AGGTGCAGAC GCCCCTGCTC
GGCGCCGCGG CCGACGGCCT GTCCGTCGGC GACCGGGTGT GGATGCGCCA CGCCAAGGCG
GGAGAACTGT GCGAGCGCTT CGACACCCTG CACCTGGTGG ACTCCGACAC CGGCGAGTAC
GCGGGCGCCG TGCCCACCTA CCGGGGCGAG GGCCAGACCT TCCTTTGA
|
|---|
| Protein sequence | MFWHAQDMTS LRETYESATR GLEAPFALVD LAALRSNAAD LTRRAHGRPI RIASKSVRSR
ELLRTVLALP GYAGVMAFTL PEALWLATGD RPLSDDVLVA YPTVDRQALA RLVRDPRAAR
AITLMVDDTA HLDLIGAAVA DAAESRGPDA PPVRVCLDVD TSWQPVGPRL RVGTYRSPVR
TPAQAAAFAR AVAARPGLEL DGIMAYEGQI AGVGDAPPGR PLYGRLLRAV QRRSAVELAK
RRAAIVHAVR EVADLRFVNG GGTGSLHTTG RERAVTELAA GSGLYHPHLF DHYRSFGGRP
AALFALPVVR RPGPGVATAL GGGYPASGPV NAHRAPLPHL PAGLSYSVNE GAGEVQTPLL
GAAADGLSVG DRVWMRHAKA GELCERFDTL HLVDSDTGEY AGAVPTYRGE GQTFL
|
|---|
| |