Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0392 |
Symbol | |
ID | 9244230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 483117 |
End bp | 483722 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003678346 |
Protein GI | 297559372 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.022112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGCGG CGAGTGGAAC GATGTCACGA AGTCAGACCC AGCGCCGCAG GCGCATCGTG CAGACCGCGG CCGCGCTGGC CGTGCGCGGT GGTGTCGAGG CCATGCAGAT GCGTTCGGTG GCCGAGCGCG CGGGGGTCGC CCTCGGCACG CTCTACCGGT ACTTCCCCTC CAAGATGGAC CTGGTGGTGG CCGTGGTCAC CGAGGAGCTG GACCTGTTGG AGGGCGGTAT CGTCCGCCGC CCGCCCACCG CCGACACCCC CGCCGAACGC GCGGTCGACG TCCTGCTGCG GGCCACGCGC GGGCTGATGC GCGAGCCGGA GCTGGCCGAC GCGCTGGTGC GCTCGCTCAT CATGGCCGAG GTCAAGATCG AGCTCGACGT GCGCATCTCC GACCTGGTGT GGCGGGTGGC CACCGGCAAC CTGGAGGGAG CCGAGGAGGA GGGCGGCGCC GAGGTGGACC GCGACAGCAC CGGCTACGTC CTGGCGGGCT CGTTGACCAG CGTGTGGATC TTCGAGCTGG TGGAGGTCCT CAAGGGGCGC CGCGACGTGG ACGAGGTGGA GCGGCGGCTC CAGACGGCGG CCGAGCGCCT GCTCGCCCCG TTCTGA
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Protein sequence | MRAASGTMSR SQTQRRRRIV QTAAALAVRG GVEAMQMRSV AERAGVALGT LYRYFPSKMD LVVAVVTEEL DLLEGGIVRR PPTADTPAER AVDVLLRATR GLMREPELAD ALVRSLIMAE VKIELDVRIS DLVWRVATGN LEGAEEEGGA EVDRDSTGYV LAGSLTSVWI FELVEVLKGR RDVDEVERRL QTAAERLLAP F
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