Gene Ndas_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0392 
Symbol 
ID9244230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp483117 
End bp483722 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003678346 
Protein GI297559372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.022112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGCGG CGAGTGGAAC GATGTCACGA AGTCAGACCC AGCGCCGCAG GCGCATCGTG 
CAGACCGCGG CCGCGCTGGC CGTGCGCGGT GGTGTCGAGG CCATGCAGAT GCGTTCGGTG
GCCGAGCGCG CGGGGGTCGC CCTCGGCACG CTCTACCGGT ACTTCCCCTC CAAGATGGAC
CTGGTGGTGG CCGTGGTCAC CGAGGAGCTG GACCTGTTGG AGGGCGGTAT CGTCCGCCGC
CCGCCCACCG CCGACACCCC CGCCGAACGC GCGGTCGACG TCCTGCTGCG GGCCACGCGC
GGGCTGATGC GCGAGCCGGA GCTGGCCGAC GCGCTGGTGC GCTCGCTCAT CATGGCCGAG
GTCAAGATCG AGCTCGACGT GCGCATCTCC GACCTGGTGT GGCGGGTGGC CACCGGCAAC
CTGGAGGGAG CCGAGGAGGA GGGCGGCGCC GAGGTGGACC GCGACAGCAC CGGCTACGTC
CTGGCGGGCT CGTTGACCAG CGTGTGGATC TTCGAGCTGG TGGAGGTCCT CAAGGGGCGC
CGCGACGTGG ACGAGGTGGA GCGGCGGCTC CAGACGGCGG CCGAGCGCCT GCTCGCCCCG
TTCTGA
 
Protein sequence
MRAASGTMSR SQTQRRRRIV QTAAALAVRG GVEAMQMRSV AERAGVALGT LYRYFPSKMD 
LVVAVVTEEL DLLEGGIVRR PPTADTPAER AVDVLLRATR GLMREPELAD ALVRSLIMAE
VKIELDVRIS DLVWRVATGN LEGAEEEGGA EVDRDSTGYV LAGSLTSVWI FELVEVLKGR
RDVDEVERRL QTAAERLLAP F