| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0321 |
|---|
| Symbol | |
|---|
| ID | 9244156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 397922 |
|---|
| End bp | 399910 |
|---|
| Gene Length | 1989 bp |
|---|
| Protein Length | 662 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcription termination factor Rho |
|---|
| Protein accession | YP_003678275 |
|---|
| Protein GI | 297559301 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.440265 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACA CCACCGAACT CCGAACGGAC GCGGCGGTCG AAGACAAAGC CACCACCGGC
GTTTCCGTGA CGGAGGCTGG CGATGGCGCG CCGACAGCCA CGCCCTCGCG GTCCCGCACG
GCGTCGCGCG GCACCGGTCT CGCGGCCCTG AAGCTCCCCG AGCTCCAGAA GCTCGCGTCC
AGCCTGGGTA TCACCGGTAC GGGGCGCATG CGCAAGAGCG ACGTCATCGC CGCGATCGAG
GCCAAGCAGG GCGGCCCGGT CGGCGGCCCC ACGAAGGCCA AAACAGCAAA GAGCGCAGAG
ACGGCGTCCA AGGCCGGTAA GGTCGAGGCA ACCGACGGCC GGGCCGAGGC TCCCGAGACG
CCGGGCACGG ACGAGGCCCC GCGCAAGCGC GCGGACAAGC AGCCGTCGGA CCAGGCCGTG
ACCGACCCCC AGGGCGGACG GGGCGACAAG CCCTCCCGCG GTCGTCGTTC GTCCCGCCGA
CGCGGTGACG AGCCCGGCGA CCAGCCCCGG GCCGTGGACG GCGCCGAATC CTCTACCTCC
GCGAGCAGCG TGACCAAGAC ATCCAGCACC CCCCAGAAGA ACGGCCCCGA CTCCGCCGAG
GACCGTGACA ACAGGTCCGG GCAGGGTCGC GAGCGCCAGC GCAACCGCCG CAACCGCAAC
CGCGGCGGTG ACGACCAGAA CGCGAACAGC AACGCCCAGC AGGGTGGTGG CGGCCAGAAC
CAGGGCCGCG GCTCCGGTGG TGGCGGTGGC GACGACGACG ACTTCGGCGG ACGCCGCCGC
GGACGCCGCC GGGACCGTCG GGACCGCCGC GGACGCGGCG GGGGCCAGGA GCCGGAGCCG
GTGATCGGCG AGGACGACGT CCTGCTGCCG GTCGCGGGCA TCCTCGACAT CCTGGACAAC
TACGCCTTCG TGCGCACCAC CGGCTACCTC CCCGGCCAGA GCGACGTCTA CGTCTCCCTG
GCCCAGGTCC GCAAGCACGG CCTGCGCAAG GGCGACCACA TCATCGGCGC GGTCCGCCAG
CCCAAGGACG GCGAGCGCAG GGAGAAGTTC AACGCCCTGG TCCGCCTGGA CTCGGTCAAC
GGCATGTCGC CCGACCAGGC CAGGGGCCGC CAGGAGTTCT CCAAGCTGGT CCCCCTGTAC
CCCCAGGAGC GCCTGCGCCT GGAGACCGAG CCGCAGATCC TCACCACGCG CATCATCGAC
CTGGTGGCGC CCATCGGCAA GGGCCAGCGC GGGCTGATCG TCTCCCCGCC CAAGGCGGGC
AAGACGATGG TGGTGCAGGC GATCGCCAAC GCCATCACCG AGAACAACCC CGAGTGCTAC
CTGATGGTGA TCCTGGTCGA CGAGCGGCCC GAGGAAGTCA CCGACATGCA GCGCACGGTC
AAGGGCGAGG TCATCCACTC GACCTTCGAC CGGCCCGCCG AGGACCACAC GGTCGTCGCC
GACCTGGCCA TCGAGCGCGC CAAGCGGCTC GTGGAGATGG GCATGGACGT CGTCGTCCTG
CTGGACTCCA TCACCCGCCT GGGCCGCGCC TACAACCTGG CCGCCCCGGC CAGCGGGCGC
ATCATGTCCG GCGGTGTGGA CTCCACGGCG CTCTACCCGC CCAAGCGCTT CTTCGGCGCG
GCCCGCAACA TCGAGGGCGG CGGCTCGCTG ACCATCCTGG CCACGGCGCT GGTCGAGACC
GGCTCGCGCG CCGACGAGGT GATCTTCGAG GAGTTCAAGG GCACCGGCAA CATGGAGCTC
AAGCTCAACC GGAGCCTGGC CGACAAGCGG ATCTTCCCGG CGGTGGACGT GGACGCGTCC
AGCACCCGCA AGGAGGAGAT CCTCATGTCC TCCGAGGAGC TGGGCGTGGT CTGGAAGCTG
CGCCGGGTGC TGCACGCGCT CGACACCCAG CAGGCCATCG AGCTGCTCCT GGACAAGATG
AAGGAGTCCA AGAGCAACGC CGAGTTCCTG CTCCAGATCC AGAAGACCAC CGTGGGCCCC
GAGCGCTGA
|
|---|
| Protein sequence | MSDTTELRTD AAVEDKATTG VSVTEAGDGA PTATPSRSRT ASRGTGLAAL KLPELQKLAS
SLGITGTGRM RKSDVIAAIE AKQGGPVGGP TKAKTAKSAE TASKAGKVEA TDGRAEAPET
PGTDEAPRKR ADKQPSDQAV TDPQGGRGDK PSRGRRSSRR RGDEPGDQPR AVDGAESSTS
ASSVTKTSST PQKNGPDSAE DRDNRSGQGR ERQRNRRNRN RGGDDQNANS NAQQGGGGQN
QGRGSGGGGG DDDDFGGRRR GRRRDRRDRR GRGGGQEPEP VIGEDDVLLP VAGILDILDN
YAFVRTTGYL PGQSDVYVSL AQVRKHGLRK GDHIIGAVRQ PKDGERREKF NALVRLDSVN
GMSPDQARGR QEFSKLVPLY PQERLRLETE PQILTTRIID LVAPIGKGQR GLIVSPPKAG
KTMVVQAIAN AITENNPECY LMVILVDERP EEVTDMQRTV KGEVIHSTFD RPAEDHTVVA
DLAIERAKRL VEMGMDVVVL LDSITRLGRA YNLAAPASGR IMSGGVDSTA LYPPKRFFGA
ARNIEGGGSL TILATALVET GSRADEVIFE EFKGTGNMEL KLNRSLADKR IFPAVDVDAS
STRKEEILMS SEELGVVWKL RRVLHALDTQ QAIELLLDKM KESKSNAEFL LQIQKTTVGP
ER
|
|---|
| |