Gene Ndas_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0311 
Symbol 
ID9244145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp387242 
End bp387976 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003678265 
Protein GI297559291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.139464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCA TGATCGAGAT ACGCGGACTC ACCAGGCGCT TCGGCGCCCA CACGGCGGTG 
GACGGGCTCA CCTTCACCGC CCGCCCCGGC CAGGTCACCG GATTTCTGGG GCCCAACGGG 
GCAGGAAAGT CCACCACGCT GCGGACACTG CTCGGGCTGG AACGGCCCGA CGGGGGCCGC 
GCCCTGGTGA ACGGGGTGCC CTACACCTCG CTGCGCAGAC CCGCAGCCAC CGTCGGCGCC 
CAGCTCGACG TCGGCGGCGC CCACCCTTCC CGTACGGCCC GCGCCCACCT GGGGTGGATC 
GCCCGGGCCA ACGGTCTGCC CGCCTCCCGG GCGGAGGAGG TTCTGGAGTG GGTCGGCCTG 
GCGCACGCCG CCCGCTCGCG GGTGCGCACG TTCTCGCTGG GCATGGGACA GCGGCTCAAC 
CTGGCCGCGG CCCTGCTCGG CGACCCGGAG GTGCTCGTGC TGGACGAACC GGTCAACGGG 
CTCGACCCTG AGGGCATCCG GTGGATTCGC GGGTTCACCC GCGGGCTCGC CGACCGCGGG 
CGCACCGTCC TGCTCTCCAG CCACCTCATG GGAGAGGTGG CCAGGATCGC CGACCACCTG 
GTGGTCATCG ACAGGGGACG GCTGGTCGCC GAGGGCGGAC CCGCGGAGCT GACCGCCGGA 
CACGACTCAC TGGAGGAGGC CTTCTTCGCC CTCGTCGGCC GGGGCCACGA GGAGTGGACC 
GGGGGCCAGC GGTGA
 
Protein sequence
MVAMIEIRGL TRRFGAHTAV DGLTFTARPG QVTGFLGPNG AGKSTTLRTL LGLERPDGGR 
ALVNGVPYTS LRRPAATVGA QLDVGGAHPS RTARAHLGWI ARANGLPASR AEEVLEWVGL 
AHAARSRVRT FSLGMGQRLN LAAALLGDPE VLVLDEPVNG LDPEGIRWIR GFTRGLADRG 
RTVLLSSHLM GEVARIADHL VVIDRGRLVA EGGPAELTAG HDSLEEAFFA LVGRGHEEWT 
GGQR