Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0300 |
Symbol | |
ID | 9244134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 373234 |
End bp | 375786 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | Osmosensitive K channel His kinase sensor |
Protein accession | YP_003678255 |
Protein GI | 297559281 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.569489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCCCG TGGCACGAGG AAAGCTCCGC ATCTACCTGG GATCGGCCCC CGGCGTCGGC ACCACGCACA ACGCCCTGGC CGAGGCCCGC AGCCGGGCCG AGCGCGGCAC CGACGTCGTG GTCGCCGCCG CCCACACCCA CCGCCGGGCA CGGACCTCCG CGCTCCTGGA GGGGCTGGAG CGGATCCCGC CGCTGCCGTC CGGTTCCGTG GACACCGCGG CCGTGATCGC GCGCGCTCCG GGGACGGCGC TGGTCGACGA CCTCGCCCGC GCCAACCCGC CCGGCTCGCC CAACGCCACC CGCTGGCAGG ACGTGGAGGA GCTGCTGGAG GCCGGCGTGG ACGTGCTGTC CACCGTGGGC ATCCACCACC TGGAGTCCCT CAACGACGTG GTCCACCAGA TCACCGGCGT GCGCCCCCGG CAGACCGTCC CCGACCACGT GGTGCGCCGC GCCGCGGAGG TCGAACTCGT GGACGTCACC CCCCAGGAGC TGCGCCGCAG GATGGCGCGC GGCGACATCC ACCCGGCCGA GAGCGTGGAC GCGGCCCTGG CCGACTACTA CCGGGAGGGC AACCTGGCGG CGCTGCGCGA GCTGGCGCTG CTGTGGACCG CCGACCGTGT GGAGGAGAGC CTGGCCCGCT ACCGCGGCGA GCACGAGATC CGGCGGACCT GGGAGGCCCG GGAGCGGGTC GTGGTGGCGC TCACCGGCGG CCCCGAGGGG GAGACGCTGA TCCGGCGGGC CGCCCGCGTG GCCGCACGCT CGCGGGGCGG GCACCCCCAG CCCAGCCACC TGCTGGCGGT GCACGTGGTG CCGCCCAACG GCATGGCGCA GGCGCCCACA GACGACCTGC TGCGGCAGCG CAGGCTGCTC GTGGAGCTGG GCGGCACCTA CCACCAGGTG GTCGGCAACG ACGTGCCGAC CGGGCTGCTG GAGTTCGCGC GGGGCGTCCA GGCCACCCAG ATCGTGCTGG GGTCCTCGCG CCGCCGCACC TGGCAGTACG TGTTCGGCCC CGGGGTCGGG GCGATCGTGG CGCGCGACTC CGGGGACATC GACGTGCACA TCGTCACCCA CGAGCGGGTG GGCAGCGGCC GGTGGCCGCT GCCGCCGCCC GGCCGGGGAC TGGGCGAGCA CCGCCGGGTG ACCGGCTGGT CGCTGGCGCT GCTGGCGCCC ACCCTGCTGT CGCTGGTGAT GGCGCTGCCC CTGTTCGAGG ACGTGGGCGC CGCCTCGGAC GCGATGCTCC TGCTGCTGGC CACCGTGGCC ACCGCGGCGG TGGGCGGCCT GCGCCCCGCC CTGGTGTCGG CGCTGTGGAG CGCGGTGCTG CTCACCGTGC TGCTGTCCCC GCTGCACGGT CGGCCCTCGG TATCGCTGGA CAACATACTG GCGCTGACCG CGTTCGCCCT GGTGGGGGCG CTGGTGGCGA TCGTGGTGGA GATGGCGGCG CGCCGGTCGG CGCAGGCCGC GCGCGCCCGG GCCGAGGCCG ACGCGGTGAC GCTGCTGGCC AGCAGCGTCC TGGCGGGCAA GGAGCCCCTC CAGGCCCTGC TGCGGCGGAT CCGGGAGACC TTCGGGCAGC GGTCGGCGAC CCTGCTGGAG CGGCTGGACG ACGAGCGCTG GCGCGCGGCT CACAGCGTGG GCGCCCCGGC GTGCGAGTCC CCCGAGGAGG CCGACGTCCT GGTCTCGATC TCCGACAACC TGGCGCTGGC GCTGCGCGGC CGGGTGCTGC CCGCCGCCGA CCGGGGCGTG CTGCGGGCCT TCGCCGCGCA CATCGGCATC GCCCTGGAGC ACCAGAGGCT GGAGTGGGAC GCGGCCGAGG CGCGCGGCCA GGTGGCGGGC AACCGCATCC GCACGGCTCT GCTGGCCGCG GTCTCGCACG ACCTGCGCAC CCCGCTGACC TCGATCAAGG CGAGCCTGTC GAGCCTGCGC GCCACCGACA TCACCCTCAC CGAGGAGGAC CGCGAGGACC TGCTGGAGAC GGTGGAGGAG TCCACCGACC GGCTCAACCG GCTGATCGAC AACCTGCTGG ACATGAGCCG GGTGCACACC GACAACGTGC GCCCCAAACT CCGCGCGGTG GGACTGGAGG AGGTCGTGCC CGTCACCCTG CTGGGCCTGC CGCACGAGGC GGTCGTGGTG GACGTGCCCG ACCGCCTGCC CCGCGTCCGC GCCGACGCCG GGCTGCTGGA GCGGGCGGTG GCCAACGTGG TCTCCAACGC GGTCCGGTAC AACCCGGACC CGCGCCTGCC GGTGCTGGTC TCGGCGAGCG CGCACGGCGA CAGCGTGCAG CTGCGCGTGG TGGACCGCGG GCCGGGGGTC TCAGACGAGG GCAAACAGCG CATGTTCGAG GCCTTCCAGC GCCTGGGCGA CGCCCCCCAG GGCACGGGGG TGGGTCTGGG TCTGGCGGTC GCGCGTGGTT TCGTTGAGGC GATGCACGGC AGGCTCGACC CCGAGGACAC GCCCGGCGGC GGTCTGACCA TGGTGTTCAC GCTCCGTGCT GTGGAGAAGA GCGAGACGGA CACCGGAGAC GGGGAGGGGA CCGATGCGTG TCCTGGTCGT TGA
|
Protein sequence | MDPVARGKLR IYLGSAPGVG TTHNALAEAR SRAERGTDVV VAAAHTHRRA RTSALLEGLE RIPPLPSGSV DTAAVIARAP GTALVDDLAR ANPPGSPNAT RWQDVEELLE AGVDVLSTVG IHHLESLNDV VHQITGVRPR QTVPDHVVRR AAEVELVDVT PQELRRRMAR GDIHPAESVD AALADYYREG NLAALRELAL LWTADRVEES LARYRGEHEI RRTWEARERV VVALTGGPEG ETLIRRAARV AARSRGGHPQ PSHLLAVHVV PPNGMAQAPT DDLLRQRRLL VELGGTYHQV VGNDVPTGLL EFARGVQATQ IVLGSSRRRT WQYVFGPGVG AIVARDSGDI DVHIVTHERV GSGRWPLPPP GRGLGEHRRV TGWSLALLAP TLLSLVMALP LFEDVGAASD AMLLLLATVA TAAVGGLRPA LVSALWSAVL LTVLLSPLHG RPSVSLDNIL ALTAFALVGA LVAIVVEMAA RRSAQAARAR AEADAVTLLA SSVLAGKEPL QALLRRIRET FGQRSATLLE RLDDERWRAA HSVGAPACES PEEADVLVSI SDNLALALRG RVLPAADRGV LRAFAAHIGI ALEHQRLEWD AAEARGQVAG NRIRTALLAA VSHDLRTPLT SIKASLSSLR ATDITLTEED REDLLETVEE STDRLNRLID NLLDMSRVHT DNVRPKLRAV GLEEVVPVTL LGLPHEAVVV DVPDRLPRVR ADAGLLERAV ANVVSNAVRY NPDPRLPVLV SASAHGDSVQ LRVVDRGPGV SDEGKQRMFE AFQRLGDAPQ GTGVGLGLAV ARGFVEAMHG RLDPEDTPGG GLTMVFTLRA VEKSETDTGD GEGTDACPGR
|
| |