Gene Ndas_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0300 
Symbol 
ID9244134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp373234 
End bp375786 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content75% 
IMG OID 
ProductOsmosensitive K channel His kinase sensor 
Protein accessionYP_003678255 
Protein GI297559281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.569489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCCG TGGCACGAGG AAAGCTCCGC ATCTACCTGG GATCGGCCCC CGGCGTCGGC 
ACCACGCACA ACGCCCTGGC CGAGGCCCGC AGCCGGGCCG AGCGCGGCAC CGACGTCGTG
GTCGCCGCCG CCCACACCCA CCGCCGGGCA CGGACCTCCG CGCTCCTGGA GGGGCTGGAG
CGGATCCCGC CGCTGCCGTC CGGTTCCGTG GACACCGCGG CCGTGATCGC GCGCGCTCCG
GGGACGGCGC TGGTCGACGA CCTCGCCCGC GCCAACCCGC CCGGCTCGCC CAACGCCACC
CGCTGGCAGG ACGTGGAGGA GCTGCTGGAG GCCGGCGTGG ACGTGCTGTC CACCGTGGGC
ATCCACCACC TGGAGTCCCT CAACGACGTG GTCCACCAGA TCACCGGCGT GCGCCCCCGG
CAGACCGTCC CCGACCACGT GGTGCGCCGC GCCGCGGAGG TCGAACTCGT GGACGTCACC
CCCCAGGAGC TGCGCCGCAG GATGGCGCGC GGCGACATCC ACCCGGCCGA GAGCGTGGAC
GCGGCCCTGG CCGACTACTA CCGGGAGGGC AACCTGGCGG CGCTGCGCGA GCTGGCGCTG
CTGTGGACCG CCGACCGTGT GGAGGAGAGC CTGGCCCGCT ACCGCGGCGA GCACGAGATC
CGGCGGACCT GGGAGGCCCG GGAGCGGGTC GTGGTGGCGC TCACCGGCGG CCCCGAGGGG
GAGACGCTGA TCCGGCGGGC CGCCCGCGTG GCCGCACGCT CGCGGGGCGG GCACCCCCAG
CCCAGCCACC TGCTGGCGGT GCACGTGGTG CCGCCCAACG GCATGGCGCA GGCGCCCACA
GACGACCTGC TGCGGCAGCG CAGGCTGCTC GTGGAGCTGG GCGGCACCTA CCACCAGGTG
GTCGGCAACG ACGTGCCGAC CGGGCTGCTG GAGTTCGCGC GGGGCGTCCA GGCCACCCAG
ATCGTGCTGG GGTCCTCGCG CCGCCGCACC TGGCAGTACG TGTTCGGCCC CGGGGTCGGG
GCGATCGTGG CGCGCGACTC CGGGGACATC GACGTGCACA TCGTCACCCA CGAGCGGGTG
GGCAGCGGCC GGTGGCCGCT GCCGCCGCCC GGCCGGGGAC TGGGCGAGCA CCGCCGGGTG
ACCGGCTGGT CGCTGGCGCT GCTGGCGCCC ACCCTGCTGT CGCTGGTGAT GGCGCTGCCC
CTGTTCGAGG ACGTGGGCGC CGCCTCGGAC GCGATGCTCC TGCTGCTGGC CACCGTGGCC
ACCGCGGCGG TGGGCGGCCT GCGCCCCGCC CTGGTGTCGG CGCTGTGGAG CGCGGTGCTG
CTCACCGTGC TGCTGTCCCC GCTGCACGGT CGGCCCTCGG TATCGCTGGA CAACATACTG
GCGCTGACCG CGTTCGCCCT GGTGGGGGCG CTGGTGGCGA TCGTGGTGGA GATGGCGGCG
CGCCGGTCGG CGCAGGCCGC GCGCGCCCGG GCCGAGGCCG ACGCGGTGAC GCTGCTGGCC
AGCAGCGTCC TGGCGGGCAA GGAGCCCCTC CAGGCCCTGC TGCGGCGGAT CCGGGAGACC
TTCGGGCAGC GGTCGGCGAC CCTGCTGGAG CGGCTGGACG ACGAGCGCTG GCGCGCGGCT
CACAGCGTGG GCGCCCCGGC GTGCGAGTCC CCCGAGGAGG CCGACGTCCT GGTCTCGATC
TCCGACAACC TGGCGCTGGC GCTGCGCGGC CGGGTGCTGC CCGCCGCCGA CCGGGGCGTG
CTGCGGGCCT TCGCCGCGCA CATCGGCATC GCCCTGGAGC ACCAGAGGCT GGAGTGGGAC
GCGGCCGAGG CGCGCGGCCA GGTGGCGGGC AACCGCATCC GCACGGCTCT GCTGGCCGCG
GTCTCGCACG ACCTGCGCAC CCCGCTGACC TCGATCAAGG CGAGCCTGTC GAGCCTGCGC
GCCACCGACA TCACCCTCAC CGAGGAGGAC CGCGAGGACC TGCTGGAGAC GGTGGAGGAG
TCCACCGACC GGCTCAACCG GCTGATCGAC AACCTGCTGG ACATGAGCCG GGTGCACACC
GACAACGTGC GCCCCAAACT CCGCGCGGTG GGACTGGAGG AGGTCGTGCC CGTCACCCTG
CTGGGCCTGC CGCACGAGGC GGTCGTGGTG GACGTGCCCG ACCGCCTGCC CCGCGTCCGC
GCCGACGCCG GGCTGCTGGA GCGGGCGGTG GCCAACGTGG TCTCCAACGC GGTCCGGTAC
AACCCGGACC CGCGCCTGCC GGTGCTGGTC TCGGCGAGCG CGCACGGCGA CAGCGTGCAG
CTGCGCGTGG TGGACCGCGG GCCGGGGGTC TCAGACGAGG GCAAACAGCG CATGTTCGAG
GCCTTCCAGC GCCTGGGCGA CGCCCCCCAG GGCACGGGGG TGGGTCTGGG TCTGGCGGTC
GCGCGTGGTT TCGTTGAGGC GATGCACGGC AGGCTCGACC CCGAGGACAC GCCCGGCGGC
GGTCTGACCA TGGTGTTCAC GCTCCGTGCT GTGGAGAAGA GCGAGACGGA CACCGGAGAC
GGGGAGGGGA CCGATGCGTG TCCTGGTCGT TGA
 
Protein sequence
MDPVARGKLR IYLGSAPGVG TTHNALAEAR SRAERGTDVV VAAAHTHRRA RTSALLEGLE 
RIPPLPSGSV DTAAVIARAP GTALVDDLAR ANPPGSPNAT RWQDVEELLE AGVDVLSTVG
IHHLESLNDV VHQITGVRPR QTVPDHVVRR AAEVELVDVT PQELRRRMAR GDIHPAESVD
AALADYYREG NLAALRELAL LWTADRVEES LARYRGEHEI RRTWEARERV VVALTGGPEG
ETLIRRAARV AARSRGGHPQ PSHLLAVHVV PPNGMAQAPT DDLLRQRRLL VELGGTYHQV
VGNDVPTGLL EFARGVQATQ IVLGSSRRRT WQYVFGPGVG AIVARDSGDI DVHIVTHERV
GSGRWPLPPP GRGLGEHRRV TGWSLALLAP TLLSLVMALP LFEDVGAASD AMLLLLATVA
TAAVGGLRPA LVSALWSAVL LTVLLSPLHG RPSVSLDNIL ALTAFALVGA LVAIVVEMAA
RRSAQAARAR AEADAVTLLA SSVLAGKEPL QALLRRIRET FGQRSATLLE RLDDERWRAA
HSVGAPACES PEEADVLVSI SDNLALALRG RVLPAADRGV LRAFAAHIGI ALEHQRLEWD
AAEARGQVAG NRIRTALLAA VSHDLRTPLT SIKASLSSLR ATDITLTEED REDLLETVEE
STDRLNRLID NLLDMSRVHT DNVRPKLRAV GLEEVVPVTL LGLPHEAVVV DVPDRLPRVR
ADAGLLERAV ANVVSNAVRY NPDPRLPVLV SASAHGDSVQ LRVVDRGPGV SDEGKQRMFE
AFQRLGDAPQ GTGVGLGLAV ARGFVEAMHG RLDPEDTPGG GLTMVFTLRA VEKSETDTGD
GEGTDACPGR