| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0278 |
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| Symbol | |
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| ID | 9244112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 344158 |
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| End bp | 346722 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_003678233 |
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| Protein GI | 297559259 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGCAG TACCCGAGCG ACGCGGTCGG AGCATCACCT CCCGCATCCG CGCAATGGTC
ATGATCCCCA CCACCGCCCT GGTGGTGCTC TGGCTGGTCC TCACCGCGGC CCTCGCCGGG
GACGCGGTCA TCCAGATCCT CCGCGCCAAC GCCACCGACG AACTGGTCAC CCCCGCCGCG
GTCGGCCTCG TGGACGTGAT GCGGGAGCGG TCGCAGACGA TCGCCCACAT CGAGAACCCG
GGGGACGCGC AGATCGAGGG CCAGCTGGCT GAGGCCCGCG AGAGCACCGA CGCCTCCCTG
GGCGAGGTCG TGGGCGAGCT CATCGGCTTC GCCGACATCG CCCCCGGCGA GAGCGGCCAC
CACATCGAGA TGCTGCACGC GCAGTACGGC GAGATCGGCG CGATCCGCTC GGCGGTGGAC
GCGGGCGAGG CCTCCCGCGC CGACGTCCTG GACTACTACA ACGAGCTGAT CCTGCACGGC
GCCGACAGCT TCGACAGCCA GGCACGCGAG GGCGACCTCG GGAACGCGGT CAGCTCCAGC
TTCACCGCGA CGTACATGTT CCGCACGGTC GACCTGTTCG CGCAGTCCGA CGCCCAGGTC
GCCCGCGCCT TCGCCACCGA CGAGCTGACC CTGGAGGACC AGCGCCGGTT CACCGAGCTG
GTCGGCTCCT ACGAGAGCAC GCTCGCGGCC AACGGCCACT ACCTGGGAGG CGAGGGCCAG
GAGGCCCGGC TGGAGAACCT GCTGGCGAGC CAGGAGTACG CCGACCTCCA GCGCATGCAG
GACGAGATCA TCGACCGCCA GGCGACCACC GAGACGGTCA CCGACCCGGT GACCCTGGTG
CCCAGCGAGG TCCAGGACCT GTCCATGCCG GTGGACTACG CCGCGTGGGA CGAGTCCTAC
GACCACGTCC TCTCCGAGCT CACCGCGATC GGCGCCGACG AGGCCCTGTA CGCCGCGGAC
GTCACCCGCG CCCAAGCCAA CCAGGCCGTG TTCCTCGCCG TGGCGGGCAG CCTCGGCGTC
GGCGTCGTCA CCGTGGCCGC CTTCCTGCTG GCCCGCCGCT CCTCGCACAC GCTCACCGAG
CGCCTGCTGC GCCTGCGCGA GGACTCCAAC GACATGGCCG AGCACCGCCT GCCCGACCTC
ATGCGCCGCC TGCACGCGGG CGAGCAGGTG GACACCTGCA CGGCCGTTCC CCAACTGGCC
GCCGACGACG ACGAGCTCGG CGACGTGGCC AGGGCGTTCA ACACCGCCCA GCGCGCGGCC
GTCAACGCGG CGGTGCAGCA GATCGAACTG CGCCAGGGCG TCAACCGCGT GTTCCTCAAC
ATCGCGCACC GCAGCCAGAC GCTGGTCCAC CGCCAGCTGC GCCTGTTGGA CCGGATGGAG
CGCGAGCAGG AGGACCCCGA GCAGCTGGCC CAGCTGTTCA AGCTCGACCA CCTGGCCACC
CGCTCCCGCC GCAACGCCGA GAACCTGCTG ATCCTGGGCG GAGAGGCGCC CGGCCGCACC
TGGCACCGCC CCATGCCGCT GATCGACGTG CTGCGCGGCG CCATCTCCGA GTCGGGCGAC
TACACCCGCG TCAAGCGCGA GCGGATCGCC CGTGTGCACC TCAACGGCCC GGCCGTGGCC
GACGTCATCC ACCTGGTCGC CGAGCTGGTC GACAACGCCG CGATGTTCTC CCCGCCGCAC
ACGCACGTGC GTCTGAGCAG CGAGGACGTG CCCAACGGCG TGACGGTCGA GATCGAGGAC
CGGGGCCTGG GCATGACCGA GAGCGAGTTC GCCTCGGCGA ACGCGCTGCT GTCCAGCCCG
CCCGAGTTCG ACGTGATGCG CTTGAACGAG AAGATGCGCC TCGGCCTGTT CGTGGTCTCG
CACCTGGCCC ACCGCCACGG CATCCGCGTG CACCTGCGCC CGTCGCCGTA CGGGGGCGTG
CAGGCCATCG TGCTGCTGCC GCACGAGCTG ATCTCCGGCG ACCGCTCCCC GCTGCCCTCC
GACGAGAGCG GCGAGCACGT GTGGGACGTG CGCGAGATCC TGGACCGCAC GCCCGGCGGC
GAGCTGTCGT CCGGCAGGCG CGTCAAGCCC GTGCTGACCT CGGTGTCCGC GCCGAAGGAG
GAGGCCCCCG ACCGCGAGGA CGAGGACTCC GGGGACTCCG CCGGGGGCGA GGGGGACGAC
ACCGTGACCG CTGAGGCCGC CGAGGCCCCG GCGGGCGGCG CGGACCTCCT CGACGCGGAC
GGCGACCGCC CCTCGCTGCC CACCCGGACG CCGCTGCCCA CGCGGACCCC GTCCGTCAGC
GCGGTCCCCG ACCCCTCCGC CGCCGAACCG CCCGCCATGG TCGAGGCGGG CGGGGGACGG
CCGCCGCTGC CCAAGCGGCG GCCCCAGGAG AACCTGGCTC CGCAGCTGGC CGCCGACCCC
CAGAGCGGCC CCGCGACGGC GGGCGGGTCC TCCTCGAACG CGGCCCAGGA CGGCCAGGAG
CGTCTGGCGC GCCTGCGCCG GAACATGTCC GCGTTCCAGA AGGGTACGGA CCGCGGACGG
CGCGAAGGCA AGCAGCAGAC CAACGACACC GACAAGGACG CGTAA
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| Protein sequence | MQAVPERRGR SITSRIRAMV MIPTTALVVL WLVLTAALAG DAVIQILRAN ATDELVTPAA
VGLVDVMRER SQTIAHIENP GDAQIEGQLA EARESTDASL GEVVGELIGF ADIAPGESGH
HIEMLHAQYG EIGAIRSAVD AGEASRADVL DYYNELILHG ADSFDSQARE GDLGNAVSSS
FTATYMFRTV DLFAQSDAQV ARAFATDELT LEDQRRFTEL VGSYESTLAA NGHYLGGEGQ
EARLENLLAS QEYADLQRMQ DEIIDRQATT ETVTDPVTLV PSEVQDLSMP VDYAAWDESY
DHVLSELTAI GADEALYAAD VTRAQANQAV FLAVAGSLGV GVVTVAAFLL ARRSSHTLTE
RLLRLREDSN DMAEHRLPDL MRRLHAGEQV DTCTAVPQLA ADDDELGDVA RAFNTAQRAA
VNAAVQQIEL RQGVNRVFLN IAHRSQTLVH RQLRLLDRME REQEDPEQLA QLFKLDHLAT
RSRRNAENLL ILGGEAPGRT WHRPMPLIDV LRGAISESGD YTRVKRERIA RVHLNGPAVA
DVIHLVAELV DNAAMFSPPH THVRLSSEDV PNGVTVEIED RGLGMTESEF ASANALLSSP
PEFDVMRLNE KMRLGLFVVS HLAHRHGIRV HLRPSPYGGV QAIVLLPHEL ISGDRSPLPS
DESGEHVWDV REILDRTPGG ELSSGRRVKP VLTSVSAPKE EAPDREDEDS GDSAGGEGDD
TVTAEAAEAP AGGADLLDAD GDRPSLPTRT PLPTRTPSVS AVPDPSAAEP PAMVEAGGGR
PPLPKRRPQE NLAPQLAADP QSGPATAGGS SSNAAQDGQE RLARLRRNMS AFQKGTDRGR
REGKQQTNDT DKDA
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