Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0197 |
Symbol | |
ID | 9244031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 248677 |
End bp | 250464 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD |
Protein accession | YP_003678153 |
Protein GI | 297559179 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCCC TTGACCCGCG CCTGGTGCGC ACCGCCAGCG CGGTACGCGC GCACCTGGCC GTCTCCGTGG CCAGCGGAGT GCTCATCACC GGCCTGATCC TGGTCCAGGC CTGGCTGCTG GCCCGCGCCG TCACCGGCGC CTGGCGGGGC GAGGGGCTGG ACACCCTGGG CTGGGTGGTC GGCGCGGTCG CGGCCGTCGC CGTGGTCCGG GCCCTGCTGT CCTACGTGGC CGAGACCTCC GCGCTGCACA GCGCCGCGCG CACCAAGTCG CAGCTGCGCC GCCGGCTGGT GGCGCACGTG ACCGGGTCGG GCAGGGTGTG GGCCGCCGAA CCCGGAGGCG AGCAGGGCTC ACCCAAGGCG GGAGAGCTGG TCACCCTGGC CACCCGGGGC CTGGACGCGC TCGACGACTA CTTCGCCCGC TACCTGCCCC AGCTGGTCCT GGCCGCGATC GTGCCGCTCG CCGTGCTGGG GGTGGTGTTC TGGGCCGACT GGATCTCGGG GATCGTCATC CTGGTGACGG TGCCGCTGAT CCCGGTGTTC ATGGCGCTGA TCGGCATGCA CACCCAGCAG CGCACCGACC GGCAGTGGAA GCTGCTGAGC CGTCTGGGCG GACACTTCCT GGACGTGGTG GAAGGGCTGC CGACCCTGGC CGTGTTCCGC CGGGCCAAGG CGCAGGCCGA GATCCTGCGC CGGGTGGGCG AGGACCACCG GCGGGCGACG ATGGGGACGC TGCGGATCGC CTTCCTGTCG GCGTTCGCGC TGGAGCTGCT GTCCACCCTG GCGGTGGCGC TGGTCGCGGT GGAGGTGGGC CTGCGCCTGC TGGGCGGCCA CATGGACTAC CAGACGGCGC TGCTGGTGCT GATCCTGGCG CCGGAGGCCT ACCTGCCGCT GCGCGAGGTG GGCGCCCGGT TCCACGCGAG CATGGAGGGC GTGTCCGCCG CCGAGCAGGT GTTCACCGAG CTGGAACGCG GACGCGGAAC GGCGCGGACC GGGGCCGCAG CCTCCGACGA CACCGCCGAG GGCCCGGCGG CGGGATCCGG CCGCCCCTCC TCCCCCGCCC CGGCGACCGG CCGGCCCGCC CCCGCAGCCG GGGGCGACAT CCGCTTCGAG GACGTGGAAC TGCTCTACCC AGGACGGGAC GTGCCCGCCC TGTCCGGACT GGACCTGGAG GTGGCGGCCG GGGAGCACCT GCTGCTCACC GGCCCCAGCG GGGCGGGCAA GTCCACCCTG CTGTCACTGC TGCTCAGGCT GAACGAGCCC ACCCGCGGGC GCGTCAGCGT GCGCGCGCCG GGCGGGCGGT GGGAGCCCCT CGGCGGGATC GACGCCGACG ACTGGCGCCT CGGCACCGCC TGGGTCCCCC AGAACCCCTA CCTGTTCGAC GTGTCCGTGG CCGACAACAT CCGGCTGGGC TCGCCCGACG CCTCCCTGGA GCGGGTCCGC GAGGCGGCCC GGCTGGCCGA GGCCGACGCG TTCGTCCGCG CCCTCCCCGA CGGCTACGAC ACCCGGCTCG GCGAGCGCGG CGCCCGGCTG TCGGCCGGGC AGAGGCAGCG GATCGCGCTG GCGCGGGCGC TGTGCCGGGA CGCCCCGCTC GTCCTGCTGG ACGAGCCCAC CGCCCACCTG GACCCGGAGA GCGCCGCGGC GGTGCGCACG GCCGTCGCCC GGCTCCTGGA GGGACGGACC GCCGTCATCG TCGCCCACGA CACCGGGTGG GCGCGCGGCG TCCTCGGGGA CACCCTGCGG ACCGCGTCGC TACCACTGCC GACCCAGGAA GGGAACGTGT CGCGATGA
|
Protein sequence | MKPLDPRLVR TASAVRAHLA VSVASGVLIT GLILVQAWLL ARAVTGAWRG EGLDTLGWVV GAVAAVAVVR ALLSYVAETS ALHSAARTKS QLRRRLVAHV TGSGRVWAAE PGGEQGSPKA GELVTLATRG LDALDDYFAR YLPQLVLAAI VPLAVLGVVF WADWISGIVI LVTVPLIPVF MALIGMHTQQ RTDRQWKLLS RLGGHFLDVV EGLPTLAVFR RAKAQAEILR RVGEDHRRAT MGTLRIAFLS AFALELLSTL AVALVAVEVG LRLLGGHMDY QTALLVLILA PEAYLPLREV GARFHASMEG VSAAEQVFTE LERGRGTART GAAASDDTAE GPAAGSGRPS SPAPATGRPA PAAGGDIRFE DVELLYPGRD VPALSGLDLE VAAGEHLLLT GPSGAGKSTL LSLLLRLNEP TRGRVSVRAP GGRWEPLGGI DADDWRLGTA WVPQNPYLFD VSVADNIRLG SPDASLERVR EAARLAEADA FVRALPDGYD TRLGERGARL SAGQRQRIAL ARALCRDAPL VLLDEPTAHL DPESAAAVRT AVARLLEGRT AVIVAHDTGW ARGVLGDTLR TASLPLPTQE GNVSR
|
| |