Gene Ndas_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0197 
Symbol 
ID9244031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp248677 
End bp250464 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content75% 
IMG OID 
ProductABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD 
Protein accessionYP_003678153 
Protein GI297559179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCC TTGACCCGCG CCTGGTGCGC ACCGCCAGCG CGGTACGCGC GCACCTGGCC 
GTCTCCGTGG CCAGCGGAGT GCTCATCACC GGCCTGATCC TGGTCCAGGC CTGGCTGCTG
GCCCGCGCCG TCACCGGCGC CTGGCGGGGC GAGGGGCTGG ACACCCTGGG CTGGGTGGTC
GGCGCGGTCG CGGCCGTCGC CGTGGTCCGG GCCCTGCTGT CCTACGTGGC CGAGACCTCC
GCGCTGCACA GCGCCGCGCG CACCAAGTCG CAGCTGCGCC GCCGGCTGGT GGCGCACGTG
ACCGGGTCGG GCAGGGTGTG GGCCGCCGAA CCCGGAGGCG AGCAGGGCTC ACCCAAGGCG
GGAGAGCTGG TCACCCTGGC CACCCGGGGC CTGGACGCGC TCGACGACTA CTTCGCCCGC
TACCTGCCCC AGCTGGTCCT GGCCGCGATC GTGCCGCTCG CCGTGCTGGG GGTGGTGTTC
TGGGCCGACT GGATCTCGGG GATCGTCATC CTGGTGACGG TGCCGCTGAT CCCGGTGTTC
ATGGCGCTGA TCGGCATGCA CACCCAGCAG CGCACCGACC GGCAGTGGAA GCTGCTGAGC
CGTCTGGGCG GACACTTCCT GGACGTGGTG GAAGGGCTGC CGACCCTGGC CGTGTTCCGC
CGGGCCAAGG CGCAGGCCGA GATCCTGCGC CGGGTGGGCG AGGACCACCG GCGGGCGACG
ATGGGGACGC TGCGGATCGC CTTCCTGTCG GCGTTCGCGC TGGAGCTGCT GTCCACCCTG
GCGGTGGCGC TGGTCGCGGT GGAGGTGGGC CTGCGCCTGC TGGGCGGCCA CATGGACTAC
CAGACGGCGC TGCTGGTGCT GATCCTGGCG CCGGAGGCCT ACCTGCCGCT GCGCGAGGTG
GGCGCCCGGT TCCACGCGAG CATGGAGGGC GTGTCCGCCG CCGAGCAGGT GTTCACCGAG
CTGGAACGCG GACGCGGAAC GGCGCGGACC GGGGCCGCAG CCTCCGACGA CACCGCCGAG
GGCCCGGCGG CGGGATCCGG CCGCCCCTCC TCCCCCGCCC CGGCGACCGG CCGGCCCGCC
CCCGCAGCCG GGGGCGACAT CCGCTTCGAG GACGTGGAAC TGCTCTACCC AGGACGGGAC
GTGCCCGCCC TGTCCGGACT GGACCTGGAG GTGGCGGCCG GGGAGCACCT GCTGCTCACC
GGCCCCAGCG GGGCGGGCAA GTCCACCCTG CTGTCACTGC TGCTCAGGCT GAACGAGCCC
ACCCGCGGGC GCGTCAGCGT GCGCGCGCCG GGCGGGCGGT GGGAGCCCCT CGGCGGGATC
GACGCCGACG ACTGGCGCCT CGGCACCGCC TGGGTCCCCC AGAACCCCTA CCTGTTCGAC
GTGTCCGTGG CCGACAACAT CCGGCTGGGC TCGCCCGACG CCTCCCTGGA GCGGGTCCGC
GAGGCGGCCC GGCTGGCCGA GGCCGACGCG TTCGTCCGCG CCCTCCCCGA CGGCTACGAC
ACCCGGCTCG GCGAGCGCGG CGCCCGGCTG TCGGCCGGGC AGAGGCAGCG GATCGCGCTG
GCGCGGGCGC TGTGCCGGGA CGCCCCGCTC GTCCTGCTGG ACGAGCCCAC CGCCCACCTG
GACCCGGAGA GCGCCGCGGC GGTGCGCACG GCCGTCGCCC GGCTCCTGGA GGGACGGACC
GCCGTCATCG TCGCCCACGA CACCGGGTGG GCGCGCGGCG TCCTCGGGGA CACCCTGCGG
ACCGCGTCGC TACCACTGCC GACCCAGGAA GGGAACGTGT CGCGATGA
 
Protein sequence
MKPLDPRLVR TASAVRAHLA VSVASGVLIT GLILVQAWLL ARAVTGAWRG EGLDTLGWVV 
GAVAAVAVVR ALLSYVAETS ALHSAARTKS QLRRRLVAHV TGSGRVWAAE PGGEQGSPKA
GELVTLATRG LDALDDYFAR YLPQLVLAAI VPLAVLGVVF WADWISGIVI LVTVPLIPVF
MALIGMHTQQ RTDRQWKLLS RLGGHFLDVV EGLPTLAVFR RAKAQAEILR RVGEDHRRAT
MGTLRIAFLS AFALELLSTL AVALVAVEVG LRLLGGHMDY QTALLVLILA PEAYLPLREV
GARFHASMEG VSAAEQVFTE LERGRGTART GAAASDDTAE GPAAGSGRPS SPAPATGRPA
PAAGGDIRFE DVELLYPGRD VPALSGLDLE VAAGEHLLLT GPSGAGKSTL LSLLLRLNEP
TRGRVSVRAP GGRWEPLGGI DADDWRLGTA WVPQNPYLFD VSVADNIRLG SPDASLERVR
EAARLAEADA FVRALPDGYD TRLGERGARL SAGQRQRIAL ARALCRDAPL VLLDEPTAHL
DPESAAAVRT AVARLLEGRT AVIVAHDTGW ARGVLGDTLR TASLPLPTQE GNVSR