| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0186 |
|---|
| Symbol | |
|---|
| ID | 9244020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 237215 |
|---|
| End bp | 237811 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | 3-isopropylmalate dehydratase, small subunit |
|---|
| Protein accession | YP_003678142 |
|---|
| Protein GI | 297559168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.506413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAGT TCGACGTCCA CACCGGTCGG GCCGTGCCGC TGCGCGCGAG CAACGTCGAC
ACCGACCAGA TCATCCCGGC CGTCTACCTC AAGCGGGTCA GCCGGACCGG CTTCGAGGAC
GGCCTGTTCG CCGAGTGGCG CAAGTCCGAC CCCGACTTCG TCCTCAACCG CCCCGAGTAC
CAGGGCGCGT CCGTGCTGGT GGCCGGGCCG GACTTCGGCA CGGGCTCCTC GCGCGAGCAC
GCCGTGTGGG CGCTCCAGGA CTACGGCTTC AAGACCGTGC TGTCCTCGCG CTTCGCCGAC
ATCTTCCGCG GCAACTCGCT CAAGGGCGGC CTGCTGACGG TCCTGCTGGC CCAGGAGGTC
ATCGACCGCG TCTGGGCGGC CGTCGAGGCC GACCCCGCCA CCGAGGTGAC CGTGGACCTG
GTCGAGCGCG AGGTGCGGGT TCCGGCGGCG GACGTGCGGG AGCCCTTCGA GCTGGACGAC
TACACCCGCT GGCGGCTCCT GGAGGGCCTG GACGACATCG CCCTGACCCT GCGCCACACG
GACGAGATCG GGGAGTTCGA GGGCACCCGC AAGCCCTGGC TGCCGGTGAC CCTCTAG
|
|---|
| Protein sequence | MEKFDVHTGR AVPLRASNVD TDQIIPAVYL KRVSRTGFED GLFAEWRKSD PDFVLNRPEY
QGASVLVAGP DFGTGSSREH AVWALQDYGF KTVLSSRFAD IFRGNSLKGG LLTVLLAQEV
IDRVWAAVEA DPATEVTVDL VEREVRVPAA DVREPFELDD YTRWRLLEGL DDIALTLRHT
DEIGEFEGTR KPWLPVTL
|
|---|
| |