| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0184 |
|---|
| Symbol | |
|---|
| ID | 9244018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 234943 |
|---|
| End bp | 235677 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_003678140 |
|---|
| Protein GI | 297559166 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.286529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAACT CTAGCTCATC CAGCGGCGTC GGTGTCCTGG ACAAGACCAT GTCCGTCCTC
GACGCCCTGG AGTCGGGACC GGCGTCCCTG GCCCAGTTGG TACAGATCAC CGGTCTGGCC
CGGCCGACGG CCCACCGGCT GGCGGTGGCG CTGGAGCGCC ACCGCATGGT CACCCGCGAC
AGCCAGGGGC GCTTCGTGCT GGGCCCGCGC CTGGGTGAGC TGTCGATAGC GACCGGCGAG
GACCGGCTGC TGGCCGTGGC CTCCCCCGTC CTGGTGCAGC TGCGCGACCT GACCGGGGAG
AGCGCGCAGC TCTACCGCCG CCAGGGGGAC CTGCGGGTGT GCGTGGCCGC CTCCGAGCGC
AGCAGCGGGC TGCGCGACAC GGTCCCGGTC GGCAGCGAGT TGCCCATGAA CGCCGGTTCG
GCCGCCCAGG TACTGCTGGC CTGGGAGGAC TCCGACCGCA TCCGCCGCTC CCTGCTGGGG
GCGCGGTTCA CGGCGGCCAG CCTGGCCCAG GTGCGCCGCC GCAGATGGGC CCAGAGCGTG
GCCGAGCGCG AGCAGGGCGT GGCGTCGGTG TCCGCGCCGG TGTCGGGCCC CGGGGGGCGC
GTGATCGCCG CCGTGTCGGT GTCGGGCCCC ATAGAGCGCC TGACCCGCTC CCCCGGCCGC
ATCCACTCCC AGGCGGTCCT GTCGGCGGCG GAGAAGATCA GCGAGTCCCT GCACAGCTAC
GAGGGCGCGC ACTAG
|
|---|
| Protein sequence | MDNSSSSSGV GVLDKTMSVL DALESGPASL AQLVQITGLA RPTAHRLAVA LERHRMVTRD
SQGRFVLGPR LGELSIATGE DRLLAVASPV LVQLRDLTGE SAQLYRRQGD LRVCVAASER
SSGLRDTVPV GSELPMNAGS AAQVLLAWED SDRIRRSLLG ARFTAASLAQ VRRRRWAQSV
AEREQGVASV SAPVSGPGGR VIAAVSVSGP IERLTRSPGR IHSQAVLSAA EKISESLHSY
EGAH
|
|---|
| |