Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0171 |
Symbol | |
ID | 9244002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 217429 |
End bp | 219189 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | acetolactate synthase, large subunit, biosynthetic type |
Protein accession | YP_003678127 |
Protein GI | 297559153 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.458212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.847135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGC AGATGACCGG CGCCCAATCG CTGATCAGGT CGCTGGAACA GGTCGGCGTT GACACTGTCT TCGGGATTCC CGGCGGCGCC ATCCTCCCGG CCTACGACCC GCTCTACGAC TCGGCCAAGG TGCGCCACAT CCTCATGCGC CACGAGCAGG GGGCCGGTCA CGCCGCCGAG GGCTACGCCT ACGCCACCGG CCGTCCGGGG GTGTGCATGG CCACCAGCGG GCCCGGCGCC ACCAACCTGG TCACCCCGCT CGCCGACGCG CACATGGACT CGGTCCCGAT GGTCGCCATC ACCGGCCAGG TCGCCTCCCC GATGATCGGC ACCGACGCCT TCCAGGAAGC CGACATCTGC GGCATCACCA TGCCGATCAC CAAGCACAAC TTCCTGGTCA AGGACGTGCG GGAGATCCCG CGGATCGTCG CCGAGGCCTT CCACATCGCC TCCAGCGGAC GCCCCGGCCC CGTCCTGGTC GACATCTCCA AGGACGCCCT GCAGAACTCC GCCGAGTTCG TCTGGCCCGA GCGCCTCGAA CTGCCCGGCT ACCGCCCGGT CACCAAGCCG CACGGCAAGC AGGTCCGCGA GGCCGCCCGC ATGATCGCCG AGGCCCGGCG CCCGGTGTTC TACGTCGGCG GCGGCGTCCT GCGCGCCGGC GCCTCCGCCG AGCTGCGCGT CCTGGCCGAG CTCACCGGCG CCCCCGTCGT CTCCACCCTG ATGGCCCGCG GCGTCTTCCC CGACAGCCAC CCGCAGTCGG TGGGCATGCC CGGCATGCAC GGCGACGTCG CCGCCGTCGG CGCCCTCCAG AAGGCCGACC TCATCGTCGC CCTGGGCGCG CGCTTCGACG ACCGCGTCAC CGGGCGCCTG GACAGCTTCG CCCCCGACGC CAAGATCGTC CACGCCGACA TCGACCCGGC CGAGATCTCC AAGAACCGCC ACGCCGACGT GCCCATCGTC GGCGACTGCC GCGAGGTCCT CGCCGACCTG GTCGTGGCCG TGCGCGCCGA CCAGGAGAAG GGCCGCCAGG GCGATTACGA GGCCTGGTGG CAGCAGCTCA ACCGCCTGCG CAACACCTAC CCCAAGGGTT ACGAGGCGCC CGAGGACGGC AGCCTGTCCC CGCAGGCCGT CATCGAGCGC CTGGGCAAGG TCGTCGGCCC GGAGGCCACC TACGTCGCGG GCGTGGGCCA GCACCAGATG TGGGCCGCCC AGTTCATCGA CTACGAGCGC CCCGGCTCCT TCGTCAACTC CGGCGGCCTG GGCACCATGG GCTTCTCCGT CCCCGCCGCG CTCGGCGCCA AGGTCGGCGA CCCCGACCGG ACCGTGTGGT CGGTCGACGG CGACGGCTGC TTCCAGATGA CCAACCAGGA ACTGGCCACC TGCGCGATCG AGGGCATCCC GGTCAAGGTC GCCGTGGTCA ACAACGGCAA CCTGGGCATG GTCCGCCAGT GGCAGACCCT GTTCTACGAG GGCCGCTACT CCAACACCGA CCTCCAGACC TCCCCGCGCG ACGAGAAGGT CCGCATCCCC GACTTCGTCC GCCTCGCGGA GGCGTACGGT TGTGTCGGCC TGCGCTGCGA GCGAGCCGAG GACATCGACG CCACCATCGA GAAGGCCATG GCGATCGACG ACGCCCCCGT CGTCGTGGAC TTCACCGTCA ACCACGACGC CATGGTCTGG CCGATGGTCG GCCCCGGCGT CAGCAACGAC AACATCCAGT ACGCGCGCGA CATGGCGCCG AACTGGGAAC ACGAGGACTA A
|
Protein sequence | MTEQMTGAQS LIRSLEQVGV DTVFGIPGGA ILPAYDPLYD SAKVRHILMR HEQGAGHAAE GYAYATGRPG VCMATSGPGA TNLVTPLADA HMDSVPMVAI TGQVASPMIG TDAFQEADIC GITMPITKHN FLVKDVREIP RIVAEAFHIA SSGRPGPVLV DISKDALQNS AEFVWPERLE LPGYRPVTKP HGKQVREAAR MIAEARRPVF YVGGGVLRAG ASAELRVLAE LTGAPVVSTL MARGVFPDSH PQSVGMPGMH GDVAAVGALQ KADLIVALGA RFDDRVTGRL DSFAPDAKIV HADIDPAEIS KNRHADVPIV GDCREVLADL VVAVRADQEK GRQGDYEAWW QQLNRLRNTY PKGYEAPEDG SLSPQAVIER LGKVVGPEAT YVAGVGQHQM WAAQFIDYER PGSFVNSGGL GTMGFSVPAA LGAKVGDPDR TVWSVDGDGC FQMTNQELAT CAIEGIPVKV AVVNNGNLGM VRQWQTLFYE GRYSNTDLQT SPRDEKVRIP DFVRLAEAYG CVGLRCERAE DIDATIEKAM AIDDAPVVVD FTVNHDAMVW PMVGPGVSND NIQYARDMAP NWEHED
|
| |