Gene Ndas_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0160 
Symbol 
ID9243991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp199084 
End bp201411 
Gene Length2328 bp 
Protein Length775 aa 
Translation table11 
GC content72% 
IMG OID 
ProductDNA ligase, NAD-dependent 
Protein accessionYP_003678116 
Protein GI297559142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC CCGACACCAC CACCGACATC CCCGACGAGG TTCGCGCCCG GCACACCGAG 
CTGTGCCAGG AACTGGACGA CCACAGTTAC CGGTACTACC TGGGCACACC GGTGATCTCC
GACGCCGAGT ACGACACCCT CATGCGTGAG CTGGTCGGCA TCGAGGACTC CTACCCCGCC
CTGGCCACCC AGGACTCGCC CACGCAGAAG GTCGGCGCGC CCATCAGCGT CGACTTCGCC
GCGGTCGAGC ACCTGGTGCG GATGGAGAGC CTGGGCAACG CCTTCGACGT CGACGAGCTC
AACGCCTGGG CCGACCGGGC CAGCGCCGAG GTGCCCGTCA ACGGCTACCT GTGCGAGCTC
AAGATCGACG GCCTGGCCGT GGACCTGGTG TACGAGAAGG GCCGCCTCGT GCGCGCCGCC
ACCCGCGGCG ACGGCCGCGT CGGCGAGGAC ATCACCCTCA ACGTGCGCAC CATCGGGGTC
GTCCCCGAGC GCCTGGACGA GAGCGTGCGC CCCGCCCCCG AGCTGCTGGA GGTGCGGGGG
GAGGTCTTCC TGCCGGTGGA GGACTTCGGA AAACTCAACG AGCGCATCAC CGCCTCGGGC
GAGCACACCC CCTTCGCCAA CCCCCGCAAC GCCGCCGCCG GGTCGCTGCG CCAGAAGGAC
CCCCGCGTCA CCGCCACCCG GCCGCTGTCG ATGATCGTGC ACGGCGTGGG CGCCTACTCT
CCGGCGAAGG ACGGCGGCGG GGAGGTGGCC TTCACCAGCC AGTCGCAGGC CTACCGGCTG
CTGGGGGAGT GGGGGCTGCC GCTCAGCGAC CGCTACCGGG TCGTCACCAC CATGGACGAG
GTCCGCGAGT ACGTGGCCCA CTACGCGGCC CACCGCCACG AGCCCGCCTA CGAGATCGAC
GGCATCGTCA TCAAGGTCGA CGACTTCGCC CTCCAGCGGC GCCTGGGCTC CACCAGCCGC
GTCCCGCGCT GGGCGATCGC CTACAAGTAC CCGCCCGAGG AGGTCACCAC CCGCCTGCTC
GACATCAAGG TGGGCGTGGG CCGTACCGGG CGCGTCACCC CCTACGGGGT CATGGAGCCG
GTGGTCGTGG CCGGGTCCGA GGTCGAGTTC GCCACCCTGC ACAACGCGCG CGAGGTCGAG
CGCAAGGGCG TGCTCATCGG CGACACCGTC GTGCTGCGCA AGGCGGGCGA CGTCATCCCC
GAGATCGTCG CCCCGGTGCT CGACCGCCGC GACGGCACCG AGCGGGCCTT CGCCATGCCC
GAGTCCTGCC CCGAGTGCGG CACCACGCTC GGCCAGCAGA AGGAGGGCGA CGTCGACCTG
CGCTGCCCCA ACGCCCGCTC CTGCCCGGGC CAGCTGCGCG AGCGCCTGTT CTTCGTGGCC
AGCCGCAAGG CCCTGGACAT CGAGGCGCTG GGCTACGTGG CCGCCACCGC CCTCACCCAG
CCGCTGGAGC CCGCCCGGCC GCCGGTGCGC GACGAGGGCG ACCTGTTCGA CCTCACCGTC
GACATGCTGC TGCCCATCCG CACCCACGTG CTCGACCCCG ACACCACCGA GCCCAAGACC
GACCCCAAGA CCGGCGAGCC CAAGGTGGTG TCCTTCTTCG CCAACAAGAA GGGCGAGCCC
AAGAAGACGG TCGAGAAGCT CTTCGAGCAG CTGGAGGAGG CCAAGTCCAA GCCGCTGTGG
CGTGTGCTGG TGGCGCTGTC CATCCGGCAC GTGGGTCCGC GCGCGGCGGA GGACCTGGCC
CGCCACTTCC GCTCCATGGA CGCCATCCGC GCGGCCAGCG AGGAGGAGCT GGCTGCGGTC
GACGGCGTCG GCCCGACCAT CGCCGCCTCC ATCCGCGAGT GGTTCTCGGT GGACTGGCAC
GCCGAGATCG TCCGCAAGTG GGCCGACGCC GGGGTGCGCA TGGAGGACGA GGACGACGGC
TCCAGGCCGC GCCACCTGGA GGGGGTCACC GTGGTGGTGA CCGGATCCCT GGAGGGCTTC
AGCCGGGACG GGGCCAAGGA GGCGATCGCC GAGCGCGGCG GCCGGGCCAC GGCGTCGGTG
TCCAAGAAGA CGGGTTTCGT GGTGGTCGGC GACAGCCCCG GCTCCAAGTA CGACAAGGCC
GTCAAGCTGG GGGTGCCGGT CCTGGACGAG GAGGGCTTCC GCGTCCTTTT GGAGGCCGGT
CCCGAGGCGG CCGAGGCCAT GCGGGTCAAC CCCGCGCCCC GGGAGCCCGG GACCGAGGAC
GCCGAGGCCG GGGCCACGGG GACCGAGGGC GCGACCGGGA CCGACGCCGT CCCCGGAACG
TCCGAAACCG TCGCCGACGC CGAGGAGGCC GTCAGGGACG AGGCCTGA
 
Protein sequence
MSAPDTTTDI PDEVRARHTE LCQELDDHSY RYYLGTPVIS DAEYDTLMRE LVGIEDSYPA 
LATQDSPTQK VGAPISVDFA AVEHLVRMES LGNAFDVDEL NAWADRASAE VPVNGYLCEL
KIDGLAVDLV YEKGRLVRAA TRGDGRVGED ITLNVRTIGV VPERLDESVR PAPELLEVRG
EVFLPVEDFG KLNERITASG EHTPFANPRN AAAGSLRQKD PRVTATRPLS MIVHGVGAYS
PAKDGGGEVA FTSQSQAYRL LGEWGLPLSD RYRVVTTMDE VREYVAHYAA HRHEPAYEID
GIVIKVDDFA LQRRLGSTSR VPRWAIAYKY PPEEVTTRLL DIKVGVGRTG RVTPYGVMEP
VVVAGSEVEF ATLHNAREVE RKGVLIGDTV VLRKAGDVIP EIVAPVLDRR DGTERAFAMP
ESCPECGTTL GQQKEGDVDL RCPNARSCPG QLRERLFFVA SRKALDIEAL GYVAATALTQ
PLEPARPPVR DEGDLFDLTV DMLLPIRTHV LDPDTTEPKT DPKTGEPKVV SFFANKKGEP
KKTVEKLFEQ LEEAKSKPLW RVLVALSIRH VGPRAAEDLA RHFRSMDAIR AASEEELAAV
DGVGPTIAAS IREWFSVDWH AEIVRKWADA GVRMEDEDDG SRPRHLEGVT VVVTGSLEGF
SRDGAKEAIA ERGGRATASV SKKTGFVVVG DSPGSKYDKA VKLGVPVLDE EGFRVLLEAG
PEAAEAMRVN PAPREPGTED AEAGATGTEG ATGTDAVPGT SETVADAEEA VRDEA