Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0139 |
Symbol | |
ID | 9243970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 172492 |
End bp | 173154 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Domain of unknown function DUF1994 |
Protein accession | YP_003678095 |
Protein GI | 297559121 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.119645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCTCCC CCCGCCCCCG TGCGCTTCCC CGCGCGCTCG CGGCCCTCAG CGCCGCCGTC CTCGCGGTCG TCCTGGGCTG GTCGGCCCCG GCCGCCGCCG ACCACGTCCT GCCCCCGGGC ATCCCCAGCG CCTCCACCGC CCAGAGCCAG CTCGACTCCC TCACCGTCCG GGCCAAGGGG CCCCAGACCG GCTACGACCG CGGCCTCTTC CCGCACTGGA GCGTCGTCGA CAGCCCCTGC ACCGCCCGCC AGTACGTGCT CGTCCGCGAC GGCCACGACG TGGTCACCGA CTCCGACTGC CAGCCGACCT CCGGCCGCTG GTACAGCACC TTCGACGACG TGTGGTGGGA CGGCGACGTC TCCCAGATCA GCGTCGACCA CATGGTTCCG CTCAGCGAGG CCTGGAAGAC CGGCGCGGCC GACTGGACCA CCGAGCGGCG CCGCGACTTC GCCAACGACG TCGACTCCCC CCAGCTGTGG GCGGTCACCG TCAGCAGCAA CAGCGCCAAG GGCGACAAGG ACCCCTCCCA GTGGATGCCG GAGAACACCG CGATCCACTG CGACTACGTC AAGGCCTGGG TCAACGTGAA GCACCGCTAC GACCTCACCG TCACCTCCGC GGAGAGGTCC GCCATCCAGG ACACCATCGA CACCGCCTGC TAG
|
Protein sequence | MPSPRPRALP RALAALSAAV LAVVLGWSAP AAADHVLPPG IPSASTAQSQ LDSLTVRAKG PQTGYDRGLF PHWSVVDSPC TARQYVLVRD GHDVVTDSDC QPTSGRWYST FDDVWWDGDV SQISVDHMVP LSEAWKTGAA DWTTERRRDF ANDVDSPQLW AVTVSSNSAK GDKDPSQWMP ENTAIHCDYV KAWVNVKHRY DLTVTSAERS AIQDTIDTAC
|
| |