Gene Ndas_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0139 
Symbol 
ID9243970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp172492 
End bp173154 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content72% 
IMG OID 
ProductDomain of unknown function DUF1994 
Protein accessionYP_003678095 
Protein GI297559121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.119645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTCCC CCCGCCCCCG TGCGCTTCCC CGCGCGCTCG CGGCCCTCAG CGCCGCCGTC 
CTCGCGGTCG TCCTGGGCTG GTCGGCCCCG GCCGCCGCCG ACCACGTCCT GCCCCCGGGC
ATCCCCAGCG CCTCCACCGC CCAGAGCCAG CTCGACTCCC TCACCGTCCG GGCCAAGGGG
CCCCAGACCG GCTACGACCG CGGCCTCTTC CCGCACTGGA GCGTCGTCGA CAGCCCCTGC
ACCGCCCGCC AGTACGTGCT CGTCCGCGAC GGCCACGACG TGGTCACCGA CTCCGACTGC
CAGCCGACCT CCGGCCGCTG GTACAGCACC TTCGACGACG TGTGGTGGGA CGGCGACGTC
TCCCAGATCA GCGTCGACCA CATGGTTCCG CTCAGCGAGG CCTGGAAGAC CGGCGCGGCC
GACTGGACCA CCGAGCGGCG CCGCGACTTC GCCAACGACG TCGACTCCCC CCAGCTGTGG
GCGGTCACCG TCAGCAGCAA CAGCGCCAAG GGCGACAAGG ACCCCTCCCA GTGGATGCCG
GAGAACACCG CGATCCACTG CGACTACGTC AAGGCCTGGG TCAACGTGAA GCACCGCTAC
GACCTCACCG TCACCTCCGC GGAGAGGTCC GCCATCCAGG ACACCATCGA CACCGCCTGC
TAG
 
Protein sequence
MPSPRPRALP RALAALSAAV LAVVLGWSAP AAADHVLPPG IPSASTAQSQ LDSLTVRAKG 
PQTGYDRGLF PHWSVVDSPC TARQYVLVRD GHDVVTDSDC QPTSGRWYST FDDVWWDGDV
SQISVDHMVP LSEAWKTGAA DWTTERRRDF ANDVDSPQLW AVTVSSNSAK GDKDPSQWMP
ENTAIHCDYV KAWVNVKHRY DLTVTSAERS AIQDTIDTAC