Gene Ndas_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0108 
Symbol 
ID9243939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp138240 
End bp138944 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content75% 
IMG OID 
Productprotein of unknown function DUF1707 
Protein accessionYP_003678065 
Protein GI297559091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCCGG GCGGGCGGAC GCGGAGCGCT CCCCCGGACG CGCCGACGCG CGATGCTCCC 
CGGACGGGCG ACCGGCCCGG GGTTTCGCCT AGTGTGGGCG GTGTGAGTGA GGAAGTGTCC
CCCGACCGGC TCCGCGCCTC CAACACCGAC CGCGAACGGG TCCTGCGGGT CCTGCGCGAG
GCCGCCGCCG ACGGCCGTCT GGACCTGGAG GAGTTCGAGG AGCGCTCCTC CCTCGCGCAC
GAGGCCCGGA CCCTGGGCGA GCTGCCCGGG ATCACCGCCG ACCTCCTCCC CGCCGAGCAG
CAGCCCATCC GCCTGGACCG CCAGCCCGTT CTGGGTCTGT TCGGCAGGGC CGAGCGCAGG
GGCCGCTGGG TGGCCTATCC CGACGAGCTG GCCGTGGCGC TGGTCGGCAG GGTCGAGGTG
GACATGCGCG AGGCGCTCCT GATGCACAAC CACCACCGCA TGACCGTGAC CGCCGTCCTG
GGCCGCGTGG AGATCGACGT CCCCGAGGGC GTCGAGGTGC GGATGACCGG CTGGTCGTTC
CTGGGCAGGC GCACCACCAC CGCGCGCCGC TCCGAGCTGT CCCATCCCCC CGTGCTGGAG
ATCGACGGGT TCTCCCTGTT CGGCGTGGTG CGCGTGCGCG CCCCCAGGAG GCGCCGCCTC
CTGGGCTGGC GCCGCCGCGA TCGCCGACGC GGCATCGGGG CCTGA
 
Protein sequence
MGPGGRTRSA PPDAPTRDAP RTGDRPGVSP SVGGVSEEVS PDRLRASNTD RERVLRVLRE 
AAADGRLDLE EFEERSSLAH EARTLGELPG ITADLLPAEQ QPIRLDRQPV LGLFGRAERR
GRWVAYPDEL AVALVGRVEV DMREALLMHN HHRMTVTAVL GRVEIDVPEG VEVRMTGWSF
LGRRTTTARR SELSHPPVLE IDGFSLFGVV RVRAPRRRRL LGWRRRDRRR GIGA