Gene Ndas_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0100 
Symbol 
ID9243931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp125960 
End bp126571 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003678057 
Protein GI297559083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.93668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGTA GTGACCACGC AGACCACGAG GAGAGCCCCG CGCCGCGGCG CCGGGTGGCG 
AGCAACGTCG ACGAGGAGCT GGAGGACCTC GCGCGCCGGG CCAAGGCCGG AGACGCCATG
GCCCTGGACG ACCTGCTCCG GCGGATCCAG CCCGAGGTCC TGCGCCGCTG CTCCCGCTTC
CTGCCCTACC GGCAGGACGC CGAGGAGGCG TGCCAGGACG CGCTGCTGCG CGTGGCGCGC
AAGATCGACA GCTTCAAGGG CGACTCCCTG TTCACCACCT GGCTGTACAC GGTGGTGTCC
AACTCCGCCC GGCAGACCTA CCGCTCCATG AAGCGGCGCT CGGCAGAGTT CCCCACCGAG
GCCGAGCGCA TGCCCCACCA GAGCGACCCC CGCACCACCA GCGTCATCGC CGGTTCCCGC
ATCGACCTGC TGGAGGCCCT CGACCAGCTG GAGAAGGACC GCCCCAACCT GGTGGCCCCC
CTGGTCCTGC GCGACCTGTG CCAGATGGAC TACAACGAGA TCGCCTCCGA GCTCAACCTG
GCCCTGGGCA CCGTCAAGTC CCGCATCCAC CAGGGGCGCA AGCACGTGCG CAAGTCCCTG
GCCGTGACGT AG
 
Protein sequence
MRSSDHADHE ESPAPRRRVA SNVDEELEDL ARRAKAGDAM ALDDLLRRIQ PEVLRRCSRF 
LPYRQDAEEA CQDALLRVAR KIDSFKGDSL FTTWLYTVVS NSARQTYRSM KRRSAEFPTE
AERMPHQSDP RTTSVIAGSR IDLLEALDQL EKDRPNLVAP LVLRDLCQMD YNEIASELNL
ALGTVKSRIH QGRKHVRKSL AVT