Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0093 |
Symbol | |
ID | 9243924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 118742 |
End bp | 119377 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | RDD domain containing protein |
Protein accession | YP_003678050 |
Protein GI | 297559076 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.173435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCGC TCCACTGGAA CCCCCAGGAA CCCCGCCCCG GCGCGTACCC GCCCCCGAAC GGGGGGTGGG GTCCCGGCGG CCCCGTGCCC GGCCAGGGCG TGTCCCCTCC GGGCGCCGGA TGGGGCGTGC CGGGGCAGGG CGCGTTCCCG GGTCCGGTGC CGGGCCCGTT CCCGACCCCG ACACCGGAGA GGGCCGCGTT CGGCCGCCGT CTGGCCGCCC GCGCCATCGA CTACGTCCTC GTGGTGATCG CCGCGGTCGT GTTCTTCGTC CTCATGGCCG TCGTGACGGT GGTCCTGACC GGCAGCGACC AGACCACCGA CGCCGAGGGC ACCCTGTGGG CGCTGCTGTT CGTGTTCGGG TGGGGTCTGC TGCTGTTCTT CTACGACTGG CTGTACCTGG TCACCTGGGG GCGCACGCTC GGCAAGATGA TGGTCGGGAT CAAGGTGGTC AGCGCCGCCG ACGGCGGCAG GCTCAGCCAG GGGCAGGCGA TGGGCCGATC CGCGTTCTTC GGCTTCCCGC AGTCCCTGCC CGTCGTGGGC CACATCTTCA CGCTGGCCGA GTCCATGGCG GCGTTCGGCG AAGAGAAGCG CGCCCTGCAC GACCGGGCCG CCGGAACCGT GGTCATCCGC ACCTGA
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Protein sequence | MSSLHWNPQE PRPGAYPPPN GGWGPGGPVP GQGVSPPGAG WGVPGQGAFP GPVPGPFPTP TPERAAFGRR LAARAIDYVL VVIAAVVFFV LMAVVTVVLT GSDQTTDAEG TLWALLFVFG WGLLLFFYDW LYLVTWGRTL GKMMVGIKVV SAADGGRLSQ GQAMGRSAFF GFPQSLPVVG HIFTLAESMA AFGEEKRALH DRAAGTVVIR T
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