Gene Ndas_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0078 
Symbol 
ID9243909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp100950 
End bp101876 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content72% 
IMG OID 
ProductProline dehydrogenase 
Protein accessionYP_003678036 
Protein GI297559062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.540911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCA AACCCCTGCT GCTCGCCGCC AGGTCCCAGA CCTGCCGCAC CATCGTCGAG 
CGCACCCCCG TCACCCGGGC CATGGTCAAG CGGTTCGTCG CGGGCTCCAC CCAGGACGAA 
GCGCTCCCCG TGGTCGGGGA GCTGACCCGG GACCGCCACG TCACCCTGGA CTTCCTGGGC 
GAGGACACCA CCGACACGGC CCAGGCCGAG GCGACGGTGA CCGCCTACCG GGACCTGCTG 
GCCGCGCTGG GCGAGGCGGG CCTGGCCGAG CGCGCCGAGG TCTCGGTCAA GCTCTCGGCC 
GTGGGCCAGT TCCTCAACAG CGACGGCGAG AAGATCGCCC TGGACAACGC CCGCCGGATC 
GCCGAGGCGG CCAAGGCGGT CGGCACCACG ATGACCCTGG ACATGGAGGA CCACACCACC 
ACCGACTCCA CGCTGGGCAT CCTGCGCGAA CTGCGCCAGG ACTTCCCCTT CGTGGGCGCG 
GTGCTCCAGG CCTACCTGCG CCGCACCGAG GCCGACTGCC GCGACCTGAG CGGGGCCGGT 
TCGCGCGTGC GCCTGTGCAA GGGGGCCTAC GACGAGCCCG AGTCGGTGGC CTTCCGCGAC 
AAGGCCGAGG TGGACAAGGC CTACGTGCGC GCGCTGCGCG TGCTGATGGA GGGCGAGGGC 
TACCCGATGG TGGCCTCGCA CGACCCGCGC ATGATCGCCA TCGCCGGCTC GCTGGCCGCC 
GCCAACGGCC GCGGCGAGGA CGACTTCGAG TACCAGATGC TCTACGGGAT CCGCGACGCC 
GAGCAGGTCC GGCTGGCCGC CGAGGGCAAC CGGATGCGGG TCTACGTGCC CTACGGCGAC 
GAGTGGTACG GCTACTACAT GCGCCGTCTG GCGGAGCGTC CGGCGAACGT GCTCTTCCTC 
GCCCGGTCCC TGGTCACGCG CGGCTAG
 
Protein sequence
MLRKPLLLAA RSQTCRTIVE RTPVTRAMVK RFVAGSTQDE ALPVVGELTR DRHVTLDFLG 
EDTTDTAQAE ATVTAYRDLL AALGEAGLAE RAEVSVKLSA VGQFLNSDGE KIALDNARRI 
AEAAKAVGTT MTLDMEDHTT TDSTLGILRE LRQDFPFVGA VLQAYLRRTE ADCRDLSGAG 
SRVRLCKGAY DEPESVAFRD KAEVDKAYVR ALRVLMEGEG YPMVASHDPR MIAIAGSLAA 
ANGRGEDDFE YQMLYGIRDA EQVRLAAEGN RMRVYVPYGD EWYGYYMRRL AERPANVLFL 
ARSLVTRG