Gene Ndas_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0068 
Symbol 
ID9243898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp90067 
End bp90624 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003678026 
Protein GI297559052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.139926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAGAG CGCGGAGCGA CACCAAGGCG CAGATCCGGG CGGTGGCCCT GGAGCTGTTC 
GCCCGCAAGG GGTTCGAGAA GACCAGCCTG CGCGAGATAG CCGAGCGCCT GGACATCACC
AAGGCCGCGC TGTACTACCA CTTCCCCTCC AAGAACGACC TGCTCACGTC ACTGGTCAGG
CCCCTGGGCG AGGACATGGA GGCGCTCTTC GCCAGGTACG GCGGCCGTGG CGGGGCCGAC
GACCCGCGCG CGCTGCTGGG CGACTACTTC GACGTCTGCG TGCGCCACAG CGCCCTGCTG
CTCGCCGTCC TCAACGACCT GGGCGCGCTG GCCGACGTGG GGCTGGTCGA ATCCGTCATC
TCCTGGCGCC GACGCCTGGA CGCCCTCCTC GTGGGGCCCG AGGGCGGCGT GCCCGCCCGG
ATGGGCGCCG TGATCGCCCT CGGCGGCATC CAGGACCTCT CGGTCATGTT CTCCCCCGAG
GAGGCCGCCG ACCACCGCGA ACGCGCCATC GACATCGCCA TGGCCGCCCT GGAGTCGGGC
ATGTCCGATA TGGACTAG
 
Protein sequence
MPRARSDTKA QIRAVALELF ARKGFEKTSL REIAERLDIT KAALYYHFPS KNDLLTSLVR 
PLGEDMEALF ARYGGRGGAD DPRALLGDYF DVCVRHSALL LAVLNDLGAL ADVGLVESVI
SWRRRLDALL VGPEGGVPAR MGAVIALGGI QDLSVMFSPE EAADHRERAI DIAMAALESG
MSDMD