| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0064 |
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| Symbol | |
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| ID | 9243894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 82228 |
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| End bp | 85833 |
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| Gene Length | 3606 bp |
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| Protein Length | 1201 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_003678022 |
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| Protein GI | 297559048 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.862894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0454923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCA TTGGACTTCT CGCCGACGTC TCCAGGGACC CGGCACTGCA CAGCGCGATC
GAGGCCGCCC GAGGCGGCCG CGATCCCCAC CTCGACCTCG TCGCCCCGGC GGCGCTGCGC
CCCTTCATGG TGGGGGCGCT GGCCGCCGAC GCCCCCGTGG GCGCGCAGCG GCCCGTGCTC
GCCGTCACCG CCACCGAGCG CGAGGCCTCC GACCTGGCCG ACGCCCTCGG CTGCCTGCTG
CCCGAGGACT CGGTGGCCCT CTTCCCCGCG TGGGAGACGC TGCCCCACGA GCGGCTCTCC
CCGCGCTCGG ACACCGTCGG CCAGCGGCTG GCCGTCCTGC GCCGCCTGGC CCACCCCGAC
CCCTCCGACC CGCTGACCAC CCCGCTGCGC GTGGTCGTGG CCCCGGTGCG CAGCGTCCTG
CAACCGCTGG TGTCCGGGCT GGGCGACCTG GAGCCGGTGC GCATCCGCCC CGGCGACGAG
GTGCCGCTGG AGGAGGTCGT CCAGGCCCTG GCCAACACCG GTTACGCCCG GGTGGACCTG
GTCGAGAAGC GCGGCGACAT GGCCGTGCGC GGCGGCATCC TGGACGTGTT CCCGCCCACC
GAGGAGCACC CGCTGCGGCT GGAGTTCTGG GGCGACACCG TCGAGGACGT CCGCTACTTC
CAGGTCGCCG ACCAGCGTTC CATCGAGTCC GGCGGCGGCG ATGACCCGCG TACCAGCGCC
TCCTCCGGGC TGTTCGCGCC GCCGTGCCGC GAACTGCTGC TCACCGACAC CGTGCGCGGG
CGCGCGCGGG CGCTGGCCGA GGAGCACCCC TCCCTGGCCG AGATCCTGCA CAAGATCGCC
GACGGCGTCG CCGTGGAGGG CATGGAGGCC TTCGCGCCCG TGCTCGCCGA GCGCATGGAG
CCGTTCCTGG CCCACCTGCC CGAGGGCGCG ATGGTGGTGG GCTGCGACCC CGAACGCATC
CGCACCCGCG CGGTGGAGCT GGAGGCCACC AGCGCCGAGT TCCTGGACGC GTCGTGGATC
AACGCCGCCT CCGGCGGCGA GGCGCCCATC GACCTGGGCG AGTCCGCCTA CATGTCCATC
TCCGAGCTGC GCTCCACCGC CGCCGAGCTG GGCCTGCCCT GGTGGGGACT GACCCCGTTC
GCCGCGGACG AGCAGGGCGG CGCGGCCGAG GAGGACGACG CCGTCGTCGT CGGCGCGGTG
CCCTCCGAGT CCTACCGGGG CGACACCGAG CGCGCGCTGG CCGACATCAA GGGATGGCTG
CACGACAACT GGAGCGTCGT CCTGGTCACC CAGGGACACG GCCCCGCCGA GCGCCTGGTC
GCGATGCTGC GCGACGCCGG GCTGGGCGCC TCCCTGTCCG CTGACCTGAC CGAGCGGCCC
AAACCGGCGG TCGCCACCGT CACCACCGGC CTGGTCGACC ACGGGTTCCT GCTGCGGTCG
GTGCGCACGG TGGTGCTCAC CGAGACCGAC CTGGCCGGAC AGAAGTCCTC CACCCGGGAC
ATGCGGCGCA TGCCCAGCAG GCGGCGCGGC ACCGTCGACC CGCTCCAGCT CAAGCCCGGC
GACTACGTCG TGCACGAACA GCACGGTGTG GGCCGCTACC TGGAGATGGT CAGCCGCCAG
GTGCAGGGCG CCACCCGCGA GTACCTGCTC ATCGAGTACG CGCCCTCCAA GCGCGGACAG
CCGGGCGACC GCCTGTTCGT GCCCACCGAG CAGCTGGGCG AGGTCACCCG GTACGTGGGC
GGCGAGGCGC CCACCCTGTC CAAGATGGGC GGCGCCGAGT GGAGCAAGGC CAAGAGCCGC
GCCCGCAAGG TGGTCCGCGA GATCGCGGGC GACCTCATCC GGCTGTACTC GGCGCGCCAG
GCCTCCCCCG GGCACGCCTT CGGCCCCGAC ACCCCGTGGC AGCGCGAACT GGAGGACGCG
TTCCCCTACG TGGAGACGCC CGACCAGCTC GCCGCCATCG ACGAGGTCAA GAAGGACATG
TCCAGGTCGG TCCCGATGGA CCGGCTGATC TGCGGCGACG TCGGCTACGG CAAGACCGAG
GTGGCCGTGC GCGCCGCCTT CAAGGCCGTG CAGGACGGCA AGCAGGTCGC CCTGCTGGTG
CCCACCACGC TGCTGGTGCA GCAGCACCTG TCCACGTTCA CCGAGCGCTA CGCCTCCTTC
CCGGTCACCG TCAAACCGAT GTCGCGGTTC CAGACCGACG GCGAGGTGGA GGCCACCCGC
GAGGGGCTGC GATCCGGCGA GGTGGACGTG GTCATCGGCA CGCACCGGCT GCTGTCCTCG
GAGACCCGCT TCAAGGACCT GGGCCTGGTC ATCATCGACG AGGAGCAGCG CTTCGGCGTG
GAGCACAAGG AGGCGCTCAA GCGGCTGCGC ACCCAGGTGG ACGTGCTGGC GATGTCGGCC
ACCCCCATCC CGCGCACCCT GGAGATGGGC CTGACCGGCA TCCGCGAGAT GACCACGATC
CTCACCCCGC CCGAGGAGCG CCACCCGGTG CTCACCTTCG TGGGCCCCTA CGAGGACAAG
CAGATCACCG CCGCGATCCG CCGCGAGCTG ATGCGCGAGG GACAGGTGTT CTTCGTGCAC
AACCGGGTGG CGTCCATCGA CAAGGTGGCG GCGAGCATCC AGCGCCTGGT GCCCGAGGCC
CGGGTGGCGT ACGCGCACGG CCAGATGAAC GAGCAGCAGC TCGAGAAGGT GATGGTCGAC
TTCTGGGAGA AGAACTTCGA CGTGCTGGTC TCCACCACCA TCGTCGAGTC AGGCCTGGAC
GTGCCCAACG CCAACACCCT GATCATCGAC CGCGCCGACA CCTACGGCCT GTCGCAGCTG
CACCAGCTGC GCGGCCGGGT GGGCCGCGGG CGCGAGCGCG CCTACGCCTA CTTCCTCTAC
CCGCCGGAGA GGCCGCTGAC CGAGACCGCC TACGAGCGGC TGGCCACCGT GGCACAGCAC
ACCGAGACCG GCGCGGGCAT GTACGTGGCC ATGAAGGACC TGGAGATCCG GGGCGCGGGC
AACATCCTGG GCGCCGAGCA GTCCGGGACC ATCGCGGGCG TGGGCTTCGA CCTGTACGTG
CGCATGGTCG GCGAGGCCGT GGCCGAGCTC AAGGGCGACC CGGACGCGGC CGAGGAGGTC
GAGACCAAGG TCGAACTGCC CATCAACGCC TACATCCCGC ACGACTACGT GCCGGGCGAG
CGGCTGCGGT TGCAGTCCTA CAAGCGCATC GCCAGCGTCA CCAGCGAGGA GGACATCCTC
GCCGCCTACG AGGAGCTCAC CGACCGCTAC GGCACCCCGC CCGAGCAGGT GGACAACCTC
ATGGCGGTGG CCCGGTTCCG GGTGCTGGCC AAGTCCGCGG GCCTGTCGGA CGTGGTGATG
CAGGGCAACC AGATCCGCTT CGCCCCGGTG GAGCTGCGCG AGTCGCAGGA GCTGCGGCTG
CGGCGCCTGT ACCCCAAGAC GATCCACAAG GAGACGACCC GGACCCTGCT GGTGCCGGTG
CCCAAGTCCG GCGGCCTGGG CGGCAGGCCC CTGCGGGACC TGGAGCTGCT CAAGTGGTGC
ACCGACCTGG TCAACTCCAT CTTCGAACCG CAGAAGAGGA AGCCCGCGCC CAAGGAGAAC
GCCTAG
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| Protein sequence | MSLIGLLADV SRDPALHSAI EAARGGRDPH LDLVAPAALR PFMVGALAAD APVGAQRPVL
AVTATEREAS DLADALGCLL PEDSVALFPA WETLPHERLS PRSDTVGQRL AVLRRLAHPD
PSDPLTTPLR VVVAPVRSVL QPLVSGLGDL EPVRIRPGDE VPLEEVVQAL ANTGYARVDL
VEKRGDMAVR GGILDVFPPT EEHPLRLEFW GDTVEDVRYF QVADQRSIES GGGDDPRTSA
SSGLFAPPCR ELLLTDTVRG RARALAEEHP SLAEILHKIA DGVAVEGMEA FAPVLAERME
PFLAHLPEGA MVVGCDPERI RTRAVELEAT SAEFLDASWI NAASGGEAPI DLGESAYMSI
SELRSTAAEL GLPWWGLTPF AADEQGGAAE EDDAVVVGAV PSESYRGDTE RALADIKGWL
HDNWSVVLVT QGHGPAERLV AMLRDAGLGA SLSADLTERP KPAVATVTTG LVDHGFLLRS
VRTVVLTETD LAGQKSSTRD MRRMPSRRRG TVDPLQLKPG DYVVHEQHGV GRYLEMVSRQ
VQGATREYLL IEYAPSKRGQ PGDRLFVPTE QLGEVTRYVG GEAPTLSKMG GAEWSKAKSR
ARKVVREIAG DLIRLYSARQ ASPGHAFGPD TPWQRELEDA FPYVETPDQL AAIDEVKKDM
SRSVPMDRLI CGDVGYGKTE VAVRAAFKAV QDGKQVALLV PTTLLVQQHL STFTERYASF
PVTVKPMSRF QTDGEVEATR EGLRSGEVDV VIGTHRLLSS ETRFKDLGLV IIDEEQRFGV
EHKEALKRLR TQVDVLAMSA TPIPRTLEMG LTGIREMTTI LTPPEERHPV LTFVGPYEDK
QITAAIRREL MREGQVFFVH NRVASIDKVA ASIQRLVPEA RVAYAHGQMN EQQLEKVMVD
FWEKNFDVLV STTIVESGLD VPNANTLIID RADTYGLSQL HQLRGRVGRG RERAYAYFLY
PPERPLTETA YERLATVAQH TETGAGMYVA MKDLEIRGAG NILGAEQSGT IAGVGFDLYV
RMVGEAVAEL KGDPDAAEEV ETKVELPINA YIPHDYVPGE RLRLQSYKRI ASVTSEEDIL
AAYEELTDRY GTPPEQVDNL MAVARFRVLA KSAGLSDVVM QGNQIRFAPV ELRESQELRL
RRLYPKTIHK ETTRTLLVPV PKSGGLGGRP LRDLELLKWC TDLVNSIFEP QKRKPAPKEN
A
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