Gene Ndas_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0055 
Symbol 
ID9243885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp72411 
End bp73478 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content72% 
IMG OID 
ProductPeptidase M23 
Protein accessionYP_003678013 
Protein GI297559039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.738429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.00000593211 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGCCACTCC CTTCCGCCCC CGGCCTCCGT GCCCTGGGCT CCAGAACCCG CACCCTGGGT 
GCCGCCGCCG TGGCCGTCGC GACCTCGGCC GTCCTGGTCG TCACCGCCCC CACCGCCCAC 
GCCCGACCGA TCCCGGCGGG CACCCCGCTC GCCTCCGCCG ACAACGTCGA GATCACCGTC 
GACAGCGACA CCGCCGAAGC CCTCCCGGGC GGGTCGGCCG CCGCGTCCCC CGAGGACGTC 
CTGGCCGAAT CGGTGATCGC CGACGTCCTG CAAGCAAGGG ACTCGTCCCT CGGCGCGCTC 
GCCCGCCAGG AGCGCGACGT GCGGGTCGAC GTCCGCGAGG CCGCCGACGG CTCGGCGTTC 
GGCGTAGCCA TCGTGACCGC GCCCATGAAC GTGGACGAGA GCCCCTACGC CTGGCTGTTC 
GCCGCCGACT ACGAGGGCTC CGCGTGGACG GTGGGCTTGG AGGGGACCGA GGAGTTCTCG 
TCCATCCTGG CCGACTCCGC ACTGCTGGAG GAGGACGAGC GGGAGACCGT CGCGGCCTCG 
ACGGACCCCT CCGGGGTCTC CACCAGCAGC TACATCGGCG TCGGGCTGCC GTTCGCCATC 
GGCTCGTCGA TGATCATGAC GGGAGGACCG CACGGCAACA GCGGAGGCCG TCCCTACAGC 
TCGGTGGACT TCGCGGGCGG CAGCGGACAG GCCCGCGCGG CCCGCGGCGG CTACGCCTAC 
AGCCTGTGCA CCGGCTGGAC GCGGGTGATC CACGACAACG GGTACTCCAC GGACTACTAC 
CACCTGGAGA ACTACCAGTG GCTGCCCGGC AACAACGTCG GGGTCGGCCA CTACCTGGGT 
ACCCAGGGCA ACAGCCTCTG CGCCGGCGGT TCGACGACCG GTGCGCACAT CCACTTCTCG 
CTGCGGGGGT ACAGCGATCC CAACGCCGCC GGCTGGTACG TCGCCCTGCA CGGCAGGACC 
CTGGGCGGCT GGACCTTCGT GGAAGGCGGC GCCTACGGCG GCTACGCCTA CCGCAACGGT 
GTCGGAACCG TCTACCCGGG CGGCTCGATG TACAACTACG GGTTCTAG
 
Protein sequence
MPLPSAPGLR ALGSRTRTLG AAAVAVATSA VLVVTAPTAH ARPIPAGTPL ASADNVEITV 
DSDTAEALPG GSAAASPEDV LAESVIADVL QARDSSLGAL ARQERDVRVD VREAADGSAF 
GVAIVTAPMN VDESPYAWLF AADYEGSAWT VGLEGTEEFS SILADSALLE EDERETVAAS 
TDPSGVSTSS YIGVGLPFAI GSSMIMTGGP HGNSGGRPYS SVDFAGGSGQ ARAARGGYAY 
SLCTGWTRVI HDNGYSTDYY HLENYQWLPG NNVGVGHYLG TQGNSLCAGG STTGAHIHFS 
LRGYSDPNAA GWYVALHGRT LGGWTFVEGG AYGGYAYRNG VGTVYPGGSM YNYGF