| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0046 |
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| Symbol | |
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| ID | 9243873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 56715 |
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| End bp | 58712 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_003678004 |
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| Protein GI | 297559030 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.541147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0349089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGCG AGCTGAACAC CACCACGTCC GGTTCGACCG GTGTCCCCGC CGACGACGGC
GCCGCGGGCG CCGACGGCCA GGCCCTGTTC CTGGACCTGC TGCTGCGCGA CGCCCCGGCC
GTGGAGTACG AGCGCCCGGT GCTGCGCGCG CGGGCGCGCG GGGACGACCC GGAGGTGGTC
GCCGCCCTGG AGGCCGCGAA GATGACGGCG CTGCGGGTGC GGTCGGTGAT GCGCGACCGG
CGGCGGCGCG AGTCGGAACT GGGCGCGCTG TTCGAGACCG CCAACGACCT GGCGGGCATG
CGCAGTCTGG ACCAGGTGCT CCAGGCGATC GTGGAGCGGG CCCGCAACCT GCTGGGCACC
GACACCGCGT ACCTGACGCT GAGCGACCCG GAGGCGGGCG GCACGTACAT GCGGGTGACG
TCGGGGTCGG TGTCGGCGGC GTTCCAGCGG TTGCGGCTGG CCCCGGGCAA GGGGTTGGGC
GGGCTGGTGG CGACCACGGC CCTGCCGTAC GTGACGGCGA ACTACTTCGC CGATCCCCGG
TTCACGCACG CGGAGAACAT CGACCACGCG GTGCGCGACG AGGGCCTGGT GGCCATCCTG
GGCGTGCCGC TGAAGATGAA CGGACGCGAC GTGGGCGTGC TGTTCGCCGC CAACCGGCGC
GAGCGCCCCT TCGCCCACTC GGAGGTGGCG CTGCTGTCGT CGCTGGCCGC GCACGCGGCG
ATCGCGATCG ACAGCGCGAA CCTCATCGAC GACACCCGGC GTGCCCTGGA CGAGCTGCAC
ACCGTCAACG AGCGGTTGCA GCGGCACACG GCGTCGGTGG AGCGGTCGGC GGCGGCGCAC
GACCGGTTGA CCGACCTGGT GCTGCGGGGC GGCGGCGTGC GCGAGGTCGC GGCGGCGGTG
GCCGAGGTGC TGGGCGGCAC GGTGCTGATC CACGACGCGA CCTCGGACTC CTCGGTGACC
GCCAGCCCGG AGGGTGTGGT GCGGGAGGGC GTCCCGTGGG ACGCGGGCGA CGGGGACCTG
GCCGAGGCGG TGCGCTCGTC GCTGGCCAGC GGCCGCGCGG TGCGGGCGGG CCGGGCGTGG
GTGGCGACGG CGGCGGCCGG GACCGAGCCG CTGGGAACGC TGGTGCTGCG CGGGGTGGAG
CTGGACTCCA CCGACCAGCG CGTCCTGGAG CGGTCGGCGA TGGTGACGGC GCTGCTGCTG
CTCATCCGGC GTTCGGTGAG CGAGACCGAG CACAGGCTGC GCGGGGACCT GCTGGACGAG
CTGTTGGAGG TGCCCGCGCG CGATCCGGTT TCGCTGCGCC AGCGGGCCGC GCTGCTGCAC
GCGGACCTGG ACGCGCCGCA CGTGCTGGTG GTGGCCGAGG CCCCGGGCGG GGACCCGGGG
CGGTTGCGCT CGGCGGCGAC CCACGTCGCG GAGACCACCG GGGGACTGGC CGGGAGCCGG
TCGGGCCGCC TGGTGCTGGC GCTGCCCGGG AGGGACCCGT CGGCGGTGGG CCGACGGGTG
GCCGACGAGC TGTCGGGTGC GGTGAACGGC CCCGTGACGG CGGGGCTGGC CGGTCCGACG
GCCGGTCCGG CCTCGTTCGG GGACGCGTTC GCCGAGGCGG CCCGGTGCCT CCAGACGCTG
CGTGCGCTGG GACGGGAGGG GGACGTGGCG ACCACGGGGG ACCTGGGGTT CTCGGGGCTG
CTGCTGAGCC AGGACCGGGA CGTGCCGGGG TTCGTGTCGG CGACGCTCGG GCCGCTGCTG
GAGTACGACG CCAGGCGGGG AACGCTGCTG GTGGAGACTC TGCGGGCGTA CTTCGCCGCC
GGGGGCAACC TGTCGCGCGC CAAGGAGGAC CTGCACATCC ACGTGAACAC GGTGGCGCAG
CGCCTGGAGC GGATCGGTCA GCTGATCGGG GCGGACTGGC AGCGTCCCGG CCGGGCGCTG
GAGCTCCAGC TGGCCCTGCA CCTGCACGGC CTGCTGGACC GGGGCGTGGA CCTGCTGGGC
GACCAGAACG GCGGTTGA
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| Protein sequence | MERELNTTTS GSTGVPADDG AAGADGQALF LDLLLRDAPA VEYERPVLRA RARGDDPEVV
AALEAAKMTA LRVRSVMRDR RRRESELGAL FETANDLAGM RSLDQVLQAI VERARNLLGT
DTAYLTLSDP EAGGTYMRVT SGSVSAAFQR LRLAPGKGLG GLVATTALPY VTANYFADPR
FTHAENIDHA VRDEGLVAIL GVPLKMNGRD VGVLFAANRR ERPFAHSEVA LLSSLAAHAA
IAIDSANLID DTRRALDELH TVNERLQRHT ASVERSAAAH DRLTDLVLRG GGVREVAAAV
AEVLGGTVLI HDATSDSSVT ASPEGVVREG VPWDAGDGDL AEAVRSSLAS GRAVRAGRAW
VATAAAGTEP LGTLVLRGVE LDSTDQRVLE RSAMVTALLL LIRRSVSETE HRLRGDLLDE
LLEVPARDPV SLRQRAALLH ADLDAPHVLV VAEAPGGDPG RLRSAATHVA ETTGGLAGSR
SGRLVLALPG RDPSAVGRRV ADELSGAVNG PVTAGLAGPT AGPASFGDAF AEAARCLQTL
RALGREGDVA TTGDLGFSGL LLSQDRDVPG FVSATLGPLL EYDARRGTLL VETLRAYFAA
GGNLSRAKED LHIHVNTVAQ RLERIGQLIG ADWQRPGRAL ELQLALHLHG LLDRGVDLLG
DQNGG
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