Gene Ndas_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0041 
Symbol 
ID9243868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp52058 
End bp52957 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_003677999 
Protein GI297559025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00123525 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0537939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG TCGTCCTGCT CGCCACCACC GGGCTCGGCC TGGGAGCCCT GTACTTCCTC 
ATCGCCTCCG GGCTCTCGCT CATCTTCGGC CTGATGGACG TGCTGAACTT CGCCCACGGC
GCCTTCCTCG CCCTCGGCGC CTACGGCACG TGGTGGGCCG CCGGGCACCT GCCCGGGGCC
GGGACGGACG GGTTCGGCTT CCTGCTCGCC GTCGCCTTCG GCGTCGGCGC GGGCACCCTG
GCCGCCACCC TGGTCGAACT CTGCGTCATC CGCCCGCTCT ACGGCAGGCA CCGCGAGCAG
ATCCTCGCCA CGGTCGGCCT CAGCCTGGCC GTCCCCGCGC TCATCCAGGC GGTCTGGGGA
GCCGACCCGC TCACCTTCCC CAAACCCGAA CTGGTGAGCG GCACCGCGGC GGTCCTCGGC
GTGAACATCC CCCGGGACCG GTTCCTGCTC ATCCTGGCCG CCGCCGCCGT GTTCGCGGCC
CTGTGGCTGT TCAACTCGCG CACCCGCTAC GGGCTCGTCG TCCGGGCGGG CGTGCAGGAC
CGCGCCATGG TCACCGCGCT GGGCATCGAC GTGCGCAGGT CGTTCACGCT GGTGTTCGCC
ATCGGCGGCG CCGCCGCGGC ACTGGCCGGG GCCCTGGGCG GACTGTACTT CGGCGTGGTC
ACCCCCACCC AGGGGATGTC CCTGCTGGTC TTCGCCTTCA TCGTCGTGGT GATCGGCGGC
ACCGCCTCGC TCACGGGCTG CGCGATCGCC GCCGTCGCGG TCGGACTCAT CCAGCAGTTC
GCCAACTACT ACACCGTCGC CGGGCTCGGC GACATCGCCG TGGTCATCGT CCTGGCGCTC
GTGCTGCTCA CCAGGCAGGG CGGTCTGACC GCGAAGAAGT CAGCGGAGAG GGTGGCATGA
 
Protein sequence
MSTVVLLATT GLGLGALYFL IASGLSLIFG LMDVLNFAHG AFLALGAYGT WWAAGHLPGA 
GTDGFGFLLA VAFGVGAGTL AATLVELCVI RPLYGRHREQ ILATVGLSLA VPALIQAVWG
ADPLTFPKPE LVSGTAAVLG VNIPRDRFLL ILAAAAVFAA LWLFNSRTRY GLVVRAGVQD
RAMVTALGID VRRSFTLVFA IGGAAAALAG ALGGLYFGVV TPTQGMSLLV FAFIVVVIGG
TASLTGCAIA AVAVGLIQQF ANYYTVAGLG DIAVVIVLAL VLLTRQGGLT AKKSAERVA