| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0036 |
|---|
| Symbol | |
|---|
| ID | 9243863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 46154 |
|---|
| End bp | 48034 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine protein kinase with PASTA sensor(s) |
|---|
| Protein accession | YP_003677994 |
|---|
| Protein GI | 297559020 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.202905 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGGGA ATAGAATCCG TGCCATGGAG ACCCCCACTC CCGATCCCCT CTTCGGCATC
ACGCTGCACG AGCGCTACAT CCTCGGAAAG CGGCTGCGCA GCGGCGCCTC GGGAACCGTC
CACGTCGCAC ACGACCTCGG CGGCGACCAG ACCGTCACGG TCACCGTGCT GCACCCCTGG
CTGGTGGGCG ACCACGGTGC CGTGCACGCG TTCCTGGACC GCGCCCAGAC CCTGGAGGGC
CTGTCCCACC CGGGGATCGC CCGGGTCCTC GGCCACGGCC GCGACGGCGA GCACGTGTAC
GCGGTCGGCG AGTACCTGTC GGGGCACACC CTCGCGGAGG CGCTGGGCGA GGGCGGCGGG
GGGCTGCGCT ACCCGGTGCA GGCGGCGCTG GCCATCGTGG CCGGGGCGCT CACCGCGCTC
GACGCCGCCC ACGGCGCGGG CGTCGTGCAC GGCGCGCTCG ACCCCCACAC GGTCGTGGTG
GACGGTGAGG GAGGGGTGCG GGTCACCGGT TTCCCCCTGC TCTTCGACGC CGAGGAGGAC
GCCGGTCCCG AGACCCGTAC CGACGTGCAC GCCGTCGGGC GGCTCCTGTA CACGCTGTTG
ACCGGGGTGC CCGCGGACCC GGAGGCCCGG CCGCTGCGGC CCTCGGCCGT CATCCCCGGC
CTGCCGTCCG ACCTGGACAT GCTGGTCGCC AACGCCACCG ACCCCAACCC GCGCTACCGC
CCGCGCGACG CGGGCCAGTA CCTCACCGTG GTCGAACAGG TGCTGCGGTC GCTGTCCGGG
GCCCCGGTGA ACCCCGCCGA CGTCGACACC CGGCCCATCC CGGTGATCAC CGACGCCCCG
CCGGAGCGAG GGGAGGAGCG CGCCGCACCG GTCCCGCCGT GGCGGCGCGT CCCCGTGCTG
GTCACCGCGG GCGTCCTGGT CCTGGTCCTG TTCGCGGCCG GGTGGGCGCT GGTCCCGGAC
GACCGCGTCG CGCTGCCCGA CCTCGTGGGC GCCTCCAGCG AGCAGGCCGA GGAGCGGCTG
GCCGGGCTCG GCATGGACCT GGCCGTGCGC TTCGAGGACG CCTACAGCGA CACCGTCGGA
GCCGGAGCGG TCGCCGACAG CACGCCCGCG CCCGGCAGCG ACGTGGCGCG GGGAGCCGAG
GTCCTGCTGC ACGTCTCCAC CGGGCCGCGG TACTCCGGGG TTCCCGACGT GGTCGGCGGC
ACCGAGAACG AGGCGCGCGA GACCCTGCGC CAGGCCGGGT TCACCGGTAT CGAGATCGTC
CAGGAGCACT CCCCCGACCA GCCCCCGGGC ACCGTCCTGT CCACCGAGCC CGCGGCGGGC
GAGGAGGGCG ACCGCGAGGA GCCGGTCGTG CTCAGCGTGA GCGAGGGCGT CATCGTCCCC
ACGCTGATCG GCATGGGCCA GGAGGAGGCC GCGACCGCCC TGGCCGGGCT CGGCCTGGTC
GTACAGGTCA CCGAGGAGCA CCACGACACC GCGCCCGTCG GCGAGGTCAG CGGGCAGACC
CCCGAACCCG GCACGATCCT GCCGGAGGAG GCCGCCGTCT CCCTCACCGT CTCCCTCGGC
CCCGAGCCGG AGGAGGAAGA GGAGGAGTCC GAGGAGGAGG CCTCCCCCTC CGACGAGGAC
GACCCCCGCG TCGACGAGGG GGAACAGGAC GGCCGGGGCG ACCAGGACGG CTGGGGCGGC
CGGGGCGATG ACGACGACGA CCGCGGACGC GGGGACGGCG GCGGCTCCTG CGACGCCCCG
CAGTGGAACG GGGGCACCGT GTACGACACC GGTGACCGCG TCCAGCACGA TGGCCGTGAG
TACGAGGCGC GCTGGTGGAT CCAGGGCTAC CCGCCGAGCG GCGACCAGTG GGGCGTGTGG
GAGGACAAGG GCTCCTGCTG A
|
|---|
| Protein sequence | MRGNRIRAME TPTPDPLFGI TLHERYILGK RLRSGASGTV HVAHDLGGDQ TVTVTVLHPW
LVGDHGAVHA FLDRAQTLEG LSHPGIARVL GHGRDGEHVY AVGEYLSGHT LAEALGEGGG
GLRYPVQAAL AIVAGALTAL DAAHGAGVVH GALDPHTVVV DGEGGVRVTG FPLLFDAEED
AGPETRTDVH AVGRLLYTLL TGVPADPEAR PLRPSAVIPG LPSDLDMLVA NATDPNPRYR
PRDAGQYLTV VEQVLRSLSG APVNPADVDT RPIPVITDAP PERGEERAAP VPPWRRVPVL
VTAGVLVLVL FAAGWALVPD DRVALPDLVG ASSEQAEERL AGLGMDLAVR FEDAYSDTVG
AGAVADSTPA PGSDVARGAE VLLHVSTGPR YSGVPDVVGG TENEARETLR QAGFTGIEIV
QEHSPDQPPG TVLSTEPAAG EEGDREEPVV LSVSEGVIVP TLIGMGQEEA ATALAGLGLV
VQVTEEHHDT APVGEVSGQT PEPGTILPEE AAVSLTVSLG PEPEEEEEES EEEASPSDED
DPRVDEGEQD GRGDQDGWGG RGDDDDDRGR GDGGGSCDAP QWNGGTVYDT GDRVQHDGRE
YEARWWIQGY PPSGDQWGVW EDKGSC
|
|---|
| |