Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0025 |
Symbol | |
ID | 9243852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 32374 |
End bp | 33459 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit |
Protein accession | YP_003677983 |
Protein GI | 297559009 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.246697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATG ACCGGGACCT TCTCCCCTCC GAGCAGCCGG TCCGGCTGCT CGACGAGACC GGAAGCCCGG TGGACGGGGC CGCCCTGCCG TTCCCGGACC GGGAGCGGCT GCTCGCCGCG TACACCTCCC TGGTGATCGG CCGCCGCGTC AACGACCAGG CCAGCGCCCT CGTGCGGCAG GGCCGCCTGG CCGTGTACCC CTCCTCGCAC GGGCAGGAGG CCTGCCAGAC GGGCGCGGCC CTGGCCCTGG CGGAGGGCGA CTGGCTCTTC CCGACCTACC GCGACACCGC CGCCGTGGTC GCGCGCGGGG TGGACCCGGT GCAGGTGCTC ACCCTGCTCA AGGGCGACTG GCACTCGGGC TACGACCCCT ACGCGCACCG CGTGGCCCCG CAGGCCACGC CGCTGGCCAC CCAGCTCCTG CACGCGGTGG GCGTCGCGCA CGCCGCCCGC CTGCGCGGTG AGGACACCGT GGTCATGGCG ATGTGCGGCG ACGGCGCCAC CAGCGAGGGC GACTTCCACG AGGCGCTGAA CTTCGCGGCG GTGTTCCGGG CCCCGGTGGT CTTCTTCGTG CAGAACAACG AGTACGCCAT CTCCGTCCCC CTGGCCCGCC AGACCGCCGC CCCCTCGCTC GCCCACAAGG GCGTCGGCTA CGGGGTGAAC GCGGAACGGG TGGACGGCAA CGACACCCCC GCGGTGCTCG CCGTGCTGGA CCGGGCCGTG GCCGCCGCGC GGGCGGGCGA GGGCCCCCAG CTCGTGGAGG CGCACACCTA CCGCATGCAG GCGCACACCA ACGCCGACGA CGCCACCCGG TACCGCACCC AGGAGGAGGT CGACCCCTGG GAGGCCCGCG ACCCCCTGCT GCGCATGGAG GCCTACCTCA CCAGGAAGCG CGTCCTCACC AAGGCCCGCA AGGCGCGCAT CGCCGAGGAC GCGGAGGCCG TGGCCGCCGC CATGCGCGAG GGCGTCACCA GGGACACCGA CCCCGAGCCC GCCGAACTGT TCGCGCACGT GTTCGCGACC CCCACGCCGC AGCTGGACGA GCAGGCCGCC TTCCTGGCCG ACGAACTGAG CAGAGAGGGC AACTGA
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Protein sequence | MADDRDLLPS EQPVRLLDET GSPVDGAALP FPDRERLLAA YTSLVIGRRV NDQASALVRQ GRLAVYPSSH GQEACQTGAA LALAEGDWLF PTYRDTAAVV ARGVDPVQVL TLLKGDWHSG YDPYAHRVAP QATPLATQLL HAVGVAHAAR LRGEDTVVMA MCGDGATSEG DFHEALNFAA VFRAPVVFFV QNNEYAISVP LARQTAAPSL AHKGVGYGVN AERVDGNDTP AVLAVLDRAV AAARAGEGPQ LVEAHTYRMQ AHTNADDATR YRTQEEVDPW EARDPLLRME AYLTRKRVLT KARKARIAED AEAVAAAMRE GVTRDTDPEP AELFAHVFAT PTPQLDEQAA FLADELSREG N
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