Gene Ndas_0007 details

Gene Information

• Locus tag: Ndas_0007
• ID: 9243833
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014210
• Strand: +
• Start bp: 9880
• End bp: 12492
• Gene Length: 2613 bp
• Protein Length: 870 aa
• Translation table: 11
• GC content: 69%
• Product: DNA gyrase, A subunit
• Protein accession: YP_003677966
• Protein GI: 297558992

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0197472
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACGGATG CGAACAACCC CGACGCCCCT GAGGGCGGGG ACTCCACTGT GGAGGCCCCG 
CCGCGCGTGA CCGACCGGAT CGAGCCCGTC GACATCCAGG TCGAGATGCA GCGCAGCTAC 
CTCGACTACG CGATGTCCGT CATCGTCGGC CGCGCCCTGC CCGACGTGCG CGACGGCCTC 
AAGCCGGTCC ACCAGCGCGT GCTCTACGCG ATGTACGACG GCGGCTACCG TCCCGACCGC 
GGCTACTTCA AGTGCGCCCG CGTCGTCGGC GACGTCATGG GCAACTACCA CCCGCACGGT 
GACAGCGCCA TCTACGACAC CCTGGTGCGC CTGGCGCAGT GGTGGTCCAT GCGGATGCCG 
CTGGTCGACC CCAACGGCAA CTTCGGCTCG GCGGGCAACG ACCCGGCCGC CGCCATGCGC 
TACACCGAGT GCAAGCTCGC GCCGCTGGCC ATGGAGATGC TCCGGGACAT CGACAAGGAC 
ACCGTCGACT TCCGGCCCAA CTACGACGGC CGCTCCTCCG AGCCCGTCGT GCTGCCCGCC 
CGCTTCCCGA ACCTGCTGGT CAACGGCTCC TCGGGCATCG CGGTCGGTAT GGCCACCAAC 
ATCCCGCCGC ACAACCTGCG CGAGGTCGCC GACGGCGTCA ACTGGTACCT CGACAACCCC 
GAGGCGCAGG ACGAGGAGCT GCTCGACGCG CTCATCGCAC GCGTCAAGGG CCCCGACTTC 
CCCACCCGCG GGCTCATCGT CGGCAAGCGC GGCATCGAGG AGGCGTACCG GACCGGGCGC 
GGCTCCATCA CCATGCGCGC CGTGGTCGAG GTGGAGGAGG ACAAGCGGGG CCGCCAGACC 
CTGGTCGTCA CCGAGCTGCC CTACCAGGTC AACCCGGACA ACCTCGCGCT CAAGATCGCC 
GACCTGGTCA AGGACGGCAA GATCACCGGC ATCGCCGACG TGCGCGACGA GAGCAGCGGC 
CGCACCGGAC AGCGCCTGGT CATCGTGCTC AAGCGCGACG CCGTCGCCAA GGTCGTGCTG 
AACAACCTCT ACAAGCACAC GCAGCTCCAG GAGACCTTCG GCGCGAACAT GCTCGCGCTG 
GTCGACGGGG TGCCGCGCAC CCTGCGCCTG GACCAGATGA TCCGGCACTG GGTCAAGCAC 
CAGGTCGAGG TCATCGTCCG CCGGACCCGG TACCTGCTGC GCAAGGCCGA GGAGCGGGCG 
CACATCCTGC GCGCGCTGCT GCGGGCCATG GACCGCATCG ACGAGGTCAT CAACCTCATC 
CGGGCCAGCG CCTCCGCGGA CCAGGCCCGC ACCGGCCTGA TGGACCTGCT GGAGATCGAC 
GACATCCAGG CCCGCGCCAT CCTCGACATG CAGCTGCGCA AGCTCGCCGC CCTGGAGCGC 
AACGCCCTGA CGGCCGAGTA CGACGAGCTC ATGGCGCAGA TCGCCGACTA CAACGACATC 
CTCGAATCGG ACACGCGCCA GCGGAGCATC ATCCGCGAGG AGCTCGGCGA GATCGTGGAG 
AAGTACGGCG ACGAGCGGCG CACGCACATC ATCCCCTTCG AGGGCGACAT GCGCATGGAG 
GACTTCATCG CCGAGGAGGA CGTGGTCGTC ACGATCTCCC GCGGTGGATA CGCCAAGCGC 
ACGCGCATCG ACAACTACCG CGCCCAGAAG CGCGGCGGCA AGGGCGTGCG CGGGGCCCAG 
CTCAAGCAGG ACGACATCGT CCAGCACTTC TTCGTCACCA CCACCCACAA CTGGATCCTG 
TGCTTCACCA ACCAGGGCCG GGTGTACCGC ACGAAGGCCT ACGAGCTGCC CGAGGCCGCC 
CGCGACGCGC GCGGCCAGCA CGTGGCGAAC CTGCTCCCGT TCCAGCCGGG CGAGGAGATC 
GCGCAGATCA TGGCGCTGCG CGACTACGAG GCCGCCCCGT ACCTGGTGCT CGCCACCCGT 
GAGGGCCTGG TCAAGAAGTC CCGTCTGGAG GACTTCGACT CGGCGCGCGC GGCGGGCATC 
ATCGCGATCA ACCTGCGCGA GGGCGACGAG CTGATCGCCG CCCGGCTGGT CTTCCCCGAC 
GACGACCTGC TGCTGATCTC CAGCGACGCC CAGGCGATCC GGTTCCCGGC CTCCGACGAG 
TCGCTGCGCC CCATGGGCCG CGCCACCAGC GGCGTGATCG GCATGCGGTT CCTGGAGGAC 
GACTACCTGC TGAGCATGGA CGTCATCCGG CCCGGCGACG GCTCCACGGA CGTCCTGGTC 
ACCACCGAGA ACGGCTACGC CAAGCGCACC CCGTCCGACC AGTACCCGGT GCAGAACCGC 
GGCGGCAAGG GCGTGCTGAC GGCCAAGGTG GTGGAGGCCC GCGGCAAGCT GGTGGGCGCC 
CTGATGATCG ACCCCGAGGT GGACGAGGTC TTCGCGATCA CCTCCGCTGG CGGTGTCATC 
CGCACCGGTG CCGACGAGGT CAAGCGGTCC GGCCGCACGA CCATGGGCGT CCGGCTGATG 
AACCTGGCCA AGGGCAACAA GATCGTGGCC GTGGCGCGCA ACGCCGAGGC CGCCGAGGAG 
GAGGCCGTCG AGACGGCCGA GGACGCGGGT GAAGCGAACG CCGACACGGC CGAGGACGTG 
AACGCGAACG CCGAAGGCAA CCCGGAGGCC TAG 

 

Protein sequence

MTDANNPDAP EGGDSTVEAP PRVTDRIEPV DIQVEMQRSY LDYAMSVIVG RALPDVRDGL 
KPVHQRVLYA MYDGGYRPDR GYFKCARVVG DVMGNYHPHG DSAIYDTLVR LAQWWSMRMP 
LVDPNGNFGS AGNDPAAAMR YTECKLAPLA MEMLRDIDKD TVDFRPNYDG RSSEPVVLPA 
RFPNLLVNGS SGIAVGMATN IPPHNLREVA DGVNWYLDNP EAQDEELLDA LIARVKGPDF 
PTRGLIVGKR GIEEAYRTGR GSITMRAVVE VEEDKRGRQT LVVTELPYQV NPDNLALKIA 
DLVKDGKITG IADVRDESSG RTGQRLVIVL KRDAVAKVVL NNLYKHTQLQ ETFGANMLAL 
VDGVPRTLRL DQMIRHWVKH QVEVIVRRTR YLLRKAEERA HILRALLRAM DRIDEVINLI 
RASASADQAR TGLMDLLEID DIQARAILDM QLRKLAALER NALTAEYDEL MAQIADYNDI 
LESDTRQRSI IREELGEIVE KYGDERRTHI IPFEGDMRME DFIAEEDVVV TISRGGYAKR 
TRIDNYRAQK RGGKGVRGAQ LKQDDIVQHF FVTTTHNWIL CFTNQGRVYR TKAYELPEAA 
RDARGQHVAN LLPFQPGEEI AQIMALRDYE AAPYLVLATR EGLVKKSRLE DFDSARAAGI 
IAINLREGDE LIAARLVFPD DDLLLISSDA QAIRFPASDE SLRPMGRATS GVIGMRFLED 
DYLLSMDVIR PGDGSTDVLV TTENGYAKRT PSDQYPVQNR GGKGVLTAKV VEARGKLVGA 
LMIDPEVDEV FAITSAGGVI RTGADEVKRS GRTTMGVRLM NLAKGNKIVA VARNAEAAEE 
EAVETAEDAG EANADTAEDV NANAEGNPEA