Gene Tbis_3469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3469 
Symbol 
ID9170000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp4051641 
End bp4054316 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content70% 
IMG OID 
ProductDNA topoisomerase I 
Protein accessionYP_003654050 
Protein GI296271418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.661677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGCCA GCAACGGCAA GGCCGGCGGT ACCCGTCTGG TGATCGTCGA GTCGCCGGCG 
AAGGCGAAGA CGATCGCCGG GTACCTTGGG CGCGGCTACA TCGTGGAGTC GAGCATCGGT
CACATCCGTG ACCTGCCGGA GAGGGCCGAG GACATCCCGG AGAAGTACCG CGGAGAGCCT
TGGGCCCGCC TCGGGGTGAA CGTCGACCAC GACTTCGAGC CGCTCTACGT CGTGAACCCT
GACAAGAAGG CGCAGGTCAC CAAGCTCAAG CAGCTCCTCA AGGAGGCCGA CGAGCTCTAC
CTGGCCACCG ACGAGGACCG GGAGGGCGAG GCCATCGCGT GGCACCTGCG CGAGGTGCTC
AAGCCCAAGA TCCCGGTGCG CCGGATGGTC TTCCACGAGA TCACGCCCAC CGCCATCCGG
GAGGCGGTGG CGAACCCGCG CGATCTCAAC CTGCGCCTCG TGGACGCCCA GGAGACCCGG
CGGATCCTCG ACCGGCTCTA CGGCTACGAG GTGAGCCCGG TCCTGTGGAA GAAGGTCAAG
CCGCGGCTCT CCGCCGGCCG GGTCCAGTCC GTCGCGACCC GCCTGGTCGT CGAGCGGGAG
CGCGAGCGGA TGGCGTTCAC CCCCGCCGAG TACTGGGACC TGCAGGCCGT CTTCGACACC
GGCCGGGCGG CCGACGAGCC CCGCACGTTC AGCGCCGCGC TCACCACGGT GGACGGCCGG
CGGATCGCCC AGGGGCGCGA CTTCACCTCG TCCGGCACCC TGAAGAGCAC CGACGTCCTC
CACCTCGATG AGGCCGCGGC CGCCGCCCTG GTGCGCCGGC TCGACGGCGC CACCTACCGG
GTGAAGTCGG TCGAGCGCCG GCCGTACACG CGCAAGCCGT ACGCGCCGTT CCGCACCACC
ACGCTGCAGC AGGAGGCGAG CCGCAAGCTC GGCTTCTCCG CCAAGTACAC GATGCAGGTG
GCGCAGCGGC TCTACGAGAA CGGCTTCATC ACCTACATGC GCACCGACAG CGTCACGCTG
TCCGAGACGG CGATCGCCGC CGCCCGCCGC CAGGCGCTCA AGCTCTACGG CCCGGCGTAC
GTCTCCGAGG AGCCGCGCGT CTACACGAGC AAGGTCAAGA ACGCGCAGGA GGCGCACGAG
GCGATCCGCC CGGCCGGGGA GGAGTTCCGC ACCCCGGGCG AGACCGGCCT GACCGGGGAC
GAGTTCCGGC TCTACGAGCT GATCTGGCAG CGCACCGTGG CGTCCCAGAT GAAGGACGCC
GTGGGCGAGT CGGTCACGGT GCGGGTCGAG GGGACCTCGG CCGGCGCCGA CCCGGTCACC
GTGGAGTTCA CCGCGACCGG CCGAACGATC ACCTTCCACG GCTTCCTCAA GGCGTACGTG
GAGGACGCGG ACGACCCGGG CACCGACCGC GACGACCAGG AGAAGCGCCT GCCGGTGCTC
AACGAGGGCG ACCGGCTCAC CGCGCAGGAG CTCAACGCGC TCGGCCACTC CACCAAGCCG
CCCGCGCGGT ACACCGAGGC GTCCCTGGTC AAGGAGCTGG AAGAGCGGGA GATCGGCCGG
CCGTCGACCT ACGCGACGAT CATCGGAACG ATCCTGGAGC GGGGGTACGT GTTCAAGAAG
GGCAACGCCC TGGTGCCCTC GTTCCTCGCC TTCGCCGTGG TCAACCTGCT GGAGCAGCAC
TTCGGCAACC TCGTCGACTA CGAGTTCACC GCCCGGATGG AGGAGTGCCT CGACGCGATC
GCGCGGGGTG AGACCGAGCG GGTCCCGTGG CTGAGGCGGT TCTACTTCGG CGAGGACCAA
GACCAAGGCC TGAAGGGCAT GGTGAACGAC CTTGGCGACA TCGACGCCAA GGAGATCTGC
TCGTTCCCGA TCAAGGGCAG CGACATCGTG GTCCGGGTCG GCCGGTACGG CCCGTACCTG
GAGCGCGGCG ACGTCCGGGT GAACATCCCC GAGGACCTCG CCCCGGACGA GCTCACCGCG
GAGAAGGCCG AGGAGCTCTT CTCCCGGCCG AGCGGGGAGC GGGAGCTCGG CATCGACCCG
GAGACCGGCC GGATGATCGT GGTGAAGGAG GGCCGGTTCG GCCCGTACGT CACCGAGATC
ATCCCCGAGG AGGAGACCGC CGCCGAGGGC AAGAAGCGGG GCAAGAAGGC CGACCAGCCC
AAGCCGCGGA CGAGCTCGCT GTTCAAGTCG ATGTCGTTCG AGACGGTCAC CCTCGAGGAC
GCGCTGAAGC TGCTCAACCT CCCGCGGGTG CTCGGCGAGA TCGACGGCGA GGTGGTGACC
GCGCAGAACG GCCGGTTCGG CCCTTACCTG AAGAAGGGCG CCGAGTCCCG CTCGCTCGCC
TCGGAGGAGG AGCTGTTCAC GGTCACGCTC GAGCAGGCCA GGGAGCTGTT CGCCCAGCCC
AAGACCCGCG GGCGGGGCCG CGCCGCCAGC GCGCCGCTGC GGGAGCTCGG CGTCGACCCG
AACACGAACC GGCCGATCGT GGTGAAGGAC GGACGGTTCG GGCCGTACGT CACCGACGGC
GAGACGAACG CGTCCCTGCG CAAGGGCGAT ACGGTGGAGG AGATCACGCT CGAGCGCGCG
GTGGAGCTCC TCGCGGATCG GCGTGAACGG GCGGCCGCCC AGAAGAGCGG CGCGGCCGGC
GGGACGAAGG CGACCAAGAA GAAGGCCGCC ACCTGA
 
Protein sequence
MPASNGKAGG TRLVIVESPA KAKTIAGYLG RGYIVESSIG HIRDLPERAE DIPEKYRGEP 
WARLGVNVDH DFEPLYVVNP DKKAQVTKLK QLLKEADELY LATDEDREGE AIAWHLREVL
KPKIPVRRMV FHEITPTAIR EAVANPRDLN LRLVDAQETR RILDRLYGYE VSPVLWKKVK
PRLSAGRVQS VATRLVVERE RERMAFTPAE YWDLQAVFDT GRAADEPRTF SAALTTVDGR
RIAQGRDFTS SGTLKSTDVL HLDEAAAAAL VRRLDGATYR VKSVERRPYT RKPYAPFRTT
TLQQEASRKL GFSAKYTMQV AQRLYENGFI TYMRTDSVTL SETAIAAARR QALKLYGPAY
VSEEPRVYTS KVKNAQEAHE AIRPAGEEFR TPGETGLTGD EFRLYELIWQ RTVASQMKDA
VGESVTVRVE GTSAGADPVT VEFTATGRTI TFHGFLKAYV EDADDPGTDR DDQEKRLPVL
NEGDRLTAQE LNALGHSTKP PARYTEASLV KELEEREIGR PSTYATIIGT ILERGYVFKK
GNALVPSFLA FAVVNLLEQH FGNLVDYEFT ARMEECLDAI ARGETERVPW LRRFYFGEDQ
DQGLKGMVND LGDIDAKEIC SFPIKGSDIV VRVGRYGPYL ERGDVRVNIP EDLAPDELTA
EKAEELFSRP SGERELGIDP ETGRMIVVKE GRFGPYVTEI IPEEETAAEG KKRGKKADQP
KPRTSSLFKS MSFETVTLED ALKLLNLPRV LGEIDGEVVT AQNGRFGPYL KKGAESRSLA
SEEELFTVTL EQARELFAQP KTRGRGRAAS APLRELGVDP NTNRPIVVKD GRFGPYVTDG
ETNASLRKGD TVEEITLERA VELLADRRER AAAQKSGAAG GTKATKKKAA T