Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_3410 |
Symbol | |
ID | 9169940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | - |
Start bp | 3981997 |
End bp | 3982815 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_003653993 |
Protein GI | 296271361 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.498178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATG TCCGGGTGCC CGGCGCCAAG GTGGCGCTGT CGACCGCCTC GGTGTACCCG GAGCGGACAC CTGACGCCTT CGAGCTGGCC GCGCGCCTGG GGTACGACGG CGTGGAGGTC ATGGTCGGCC AGGACCCGGT GAGCCAGGAC GTGGAGGTGC TCCGGCGGCT CAGCGACCAC TACGAGGTGC CGGTCCTCGC GGTGCACGCG CCCTGCCTCC TGGTCACCCA GCGGGTGTGG GGCCGTGATC CCTGGGTCAA GCTGCGCCGG GCGCGGGAGG CGGCCGAGCG CCTGGGGGCG TCCACCGTGG TGGTGCACCC GCCGTTCCGC TGGCAGCGCG AGTACGCCAG GGAGTTCGAG GCGGGGCTCG CCCGGATGCG CGAGGAGACC GACGTCGTCT TCGCGGTGGA GAACATGTTC CCGCTCCGGG CGCGGGGCAG CGAGGTCGTG CCGTACGCGC CGGGCTGGAA CCCGGTCGAC TACGACTACC CGCACGTGAC GCTCGACCTG TCGCACACCG CGGTCGCCGG CGTCGACGCG CTCGAGATGG CGGCGAAGCT GGGGGACCGG CTGGCGCACC TGCACCTCGC GGACGGGGTC GGCACCACCA ACAAGGACGA GCACCTGGTG CCGGGGCGGG GCGCCCAGCC GTGCGCGCAG GTCCTGGAGC GCCTGGCGAG CACCGGGTAC ACCGGCCTCA TCGTCCTGGA GATCAACACC CGTAAGGCGG TGAGCCGTAG CGAGCGGATC AAGGACCTCG CCGAAGGGCT GGCGTTCGCC CGGACGCACT TCGCCGCCGC GTCGACCCCC GCCTCATGA
|
Protein sequence | MSDVRVPGAK VALSTASVYP ERTPDAFELA ARLGYDGVEV MVGQDPVSQD VEVLRRLSDH YEVPVLAVHA PCLLVTQRVW GRDPWVKLRR AREAAERLGA STVVVHPPFR WQREYAREFE AGLARMREET DVVFAVENMF PLRARGSEVV PYAPGWNPVD YDYPHVTLDL SHTAVAGVDA LEMAAKLGDR LAHLHLADGV GTTNKDEHLV PGRGAQPCAQ VLERLASTGY TGLIVLEINT RKAVSRSERI KDLAEGLAFA RTHFAAASTP AS
|
| |