Gene Tbis_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3352 
Symbol 
ID9169878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3926586 
End bp3927458 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content72% 
IMG OID 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003653935 
Protein GI296271303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.939997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGAC GAGCGCTTGC CGCCGCGGCT CTCGGCCTGG TGACGGCCGG AGCCGTCGCC 
TGCGGCGGAG AGACGGCCGC CCCGGGCACC GCCGGCGCAT TCACCGACGG CGGAAGCACC
GCGTCCCCGG CCCCGGAGCG GAGCCGGCTC AGCCCGGCCG CCCCTGCGGC GGGCGCCGCG
ATCGCCGCGA GCCCGGCGTC GGCCGCGGCC CGACCGCTCG CCGGAAAGGT CATCGTCATC
GACCCCGGCC ACAACGGGAA CAACTGGCGG GCCCCGGAAA AGATCAACAA GAAGGTGAAC
GCGGTCACCA TGTGGAAGCC ATGTGACACC ACGGGGACCA CCACCAACGA CGGCTACCCC
GAGTCCGCGT TCGCCTGGGA CGTCGCCACC CGGCTGGCCA AGCTGCTCCG GGCCCAGGGC
GCGACCGTCA AGCTCACCCG CGAGGACAAC AAGGGCGTCG GGCCGTGCAT CACCGAGCGC
GCGGCCATCG CCAACCGCGC CAAGGCCGAC GCATCCATCT CCATCCACGC CGACGGCGCC
GGGCAGGGCA CCCGCGGCTT CCACGTCATC GTGCCCAAGA AGATCAACGG CCCGGTCGAC
CCGGTGGTGG GCGACTCCCT CCGCCTGGGC GTCGCCATCC GGAACGCGGT CCGCGAGGTC
ACCGGCCTGC CGTACGCGAA CTACATCGGC AAGAACGGCA TCGACCGGCG GGGCGACCTC
GGCGGGCTCA ACCTGTCCAC GGTCCCCAAG GTCTTCCTCG AGACCGGCAA CATGCGCAAC
CCCACCGACG CGAGGAAGAT GAAGGACCCC GCCTTCCGGC AGCGGCTCGC CGAGGCGCTG
GCGAAGGGCC TCCGGGACTA CCTGAGCCGG TAG
 
Protein sequence
MIRRALAAAA LGLVTAGAVA CGGETAAPGT AGAFTDGGST ASPAPERSRL SPAAPAAGAA 
IAASPASAAA RPLAGKVIVI DPGHNGNNWR APEKINKKVN AVTMWKPCDT TGTTTNDGYP
ESAFAWDVAT RLAKLLRAQG ATVKLTREDN KGVGPCITER AAIANRAKAD ASISIHADGA
GQGTRGFHVI VPKKINGPVD PVVGDSLRLG VAIRNAVREV TGLPYANYIG KNGIDRRGDL
GGLNLSTVPK VFLETGNMRN PTDARKMKDP AFRQRLAEAL AKGLRDYLSR