Gene Tbis_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3334 
Symbol 
ID9169860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3907424 
End bp3908743 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content72% 
IMG OID 
Productmajor facilitator superfamily protein 
Protein accessionYP_003653917 
Protein GI296271285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.998489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAC GCACCCCCCA CTCCGCCGGC GCGCCCAGAC GCGCCGCCAT CGCAGCGTTC 
GTCGGCACCA CGATCGAGTG GTACGACTTC TACGTCTACG CGACCGCGGC CGCGCTGATC
TTCGGCGACC TGTTCTTCCC CGAGTCCACG GACCCGCTGG TCGCCCTCAT GGCGTCGTTC
GCCACCTACG CCGTCGGGTT CTTCGCCCGC CCCCTCGGCG GGATCGTCTT CGGCCACTTC
GGCGACCGGG TGGGCCGCAA GTCGGCGCTC GTGGTCACCC TGCTCATGAT GGGCGTGGCG
ACGTTCCTCG TCGGGCTGCT CCCCACCTAC GAGACGATCG GCGTGCTCGC GCCCATCGCC
CTGGTGACCC TCCGCGTCGT GCAAGGGCTC GCCGTGGGCG GCGAGTGGGG CGGCGCCGTG
CTCATGGCGG TCGAGCACGC CCCGGAGAAG AACCGGACCT TCTTCGGCGG CTTCGCCCAG
CTCGGCAACC CCGCCGGAGC CCTCCTCGCC ACCGGGGCGT TCAGCCTCGT CACCGCCGCC
GGGGACGACG TGCTCCGTAC CTGGGGCTGG CGGATCCCGT TCCTCGCCTC GGCCGTGCTC
GTGCTCGTCG GCCTGTTCAT CCGGCTCCGC GTCGAGGAGT CGCCCGTCTT CCGGCAGGTG
CTCGCCGAGA AGCCCGTCGC CCTGCCGATC AAGGAGGCGC TCCGCACCTC GTGGCGGACC
ATCCTCCTCG GCATCGGCAC GCTCCCCGTG GCCATCGGCG GCTACTACAT CGCCACCACG
TTCCTGCTCG CCTACTCCAC CGGCCCCGAG GTCGGCGCGT CCGAGCAGCT CGTGCTCAAC
GGCCTCAGCT TCGCCTCGTT CGTCGAGCTC GTCGCCACCC TGGGCGTCTC CTGGCTGGGC
GACCGGTTCG GCACCCGCCG GGTCGTGGCG ATCGGCCTCG CCGCCGTGGC GCTGCTCGCG
TTCCCGCAGT TCATGGTCAT GGGATCGGGC AACGCGTTCC TCATCTTCCT GATGCTCGGC
GCGATGCGGC TCGCCATGTC CGCGACCTAC GGCCCGATCG CCACCCTGCT GGCGGAGATG
TACGCCCCGA AGGTGCGGTA CACGGCGATG TCCCTCGCCT ACCAGGTCGC CGGAGCGGTC
TTCGGCGGGC TCTCCCCGCT CGCGGCCACC GCGCTGGTCA AGGCCGGAGG CGGCGGACCG
GTCCCCGCGA TCCTGCTGCT CATCGCCATG TGCGTGCTGA GCCTGGTCTG CCTGGCCTTC
GCGCCGCGCC ACCGCGACGC CGTACCGCAA CCGGCGGTGC CCGGGCACGC CCTGTCCTGA
 
Protein sequence
MDGRTPHSAG APRRAAIAAF VGTTIEWYDF YVYATAAALI FGDLFFPEST DPLVALMASF 
ATYAVGFFAR PLGGIVFGHF GDRVGRKSAL VVTLLMMGVA TFLVGLLPTY ETIGVLAPIA
LVTLRVVQGL AVGGEWGGAV LMAVEHAPEK NRTFFGGFAQ LGNPAGALLA TGAFSLVTAA
GDDVLRTWGW RIPFLASAVL VLVGLFIRLR VEESPVFRQV LAEKPVALPI KEALRTSWRT
ILLGIGTLPV AIGGYYIATT FLLAYSTGPE VGASEQLVLN GLSFASFVEL VATLGVSWLG
DRFGTRRVVA IGLAAVALLA FPQFMVMGSG NAFLIFLMLG AMRLAMSATY GPIATLLAEM
YAPKVRYTAM SLAYQVAGAV FGGLSPLAAT ALVKAGGGGP VPAILLLIAM CVLSLVCLAF
APRHRDAVPQ PAVPGHALS