Gene Tbis_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3311 
Symbol 
ID9169834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3868582 
End bp3870264 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content66% 
IMG OID 
Productextracellular solute-binding protein family 5 
Protein accessionYP_003653894 
Protein GI296271262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGA CTAAGGGCGC GAAGATCGCT GCCGGATCCG CGCTGCTCGC CCTCGGCGTC 
GCCGCGTGCG GCGGTGGCGG TGGCGGCTCC GGCAGCGAGA CGAACCCGCG CGCTGCCGAC
GGCACCGTCT ATATTCGCGG CTGCGAGCCC CAGACCGGAC TCGTGCCGGG CAACATCAAC
GAGACCTGCG GTGGTACGAT CGCCGACTTC ATCTACAGCA AGCTGGTGAA GTACAACTCG
GACACCGCGG CTCCCGAGCT CGACCAGGCC GAGTCCATCG AGACGAGCGA CAACCGGGTC
TGGACGATCA AGCTCAAGCC GGGCCTCAAG TGGAGCGACG GCACCCCGGT CACGGCCAAG
AACTACGTCG ACGCGTGGAA CTACACCGCG TACTCCCCGA ACCAGCAGAT CGGTGCTCCC
TGGTTCGCCG ACATCGAGGG CTTCGAGGAC GTCTACACCG AGGACCCGGA CGGTCCGGAC
GGCCCGAAGG AGGCGCCCAC CCCGAAGAGC GACAAGATGT CCGGCCTTGA GGTGATCGAC
GAGCTCACCT TCAAGGTCAC GCTCAAGGCG CCGCAGGCGG TGTTCCGCAC CAAGCTCGGG
TACTCGACCT TCGCGCCGCT CCCCGAGGCG TTCTTCAAGG ACCCCAAGGG CTTCGCCCAG
AACCCGATCA GCAACGGCCC CTTCAAGTTC GTGAAGTGGG ACCACAACAA GGAGATCGTG
GTCGAGGCGA ACCCCGACTA CCACGGGGCG GAGAAGCCGA AGGTCAAGCG GATCGTCTAC
CGCATGTACC AGAACGACGA CGCCGCCTAC GCCGACCTGC TCTCCAACAA CCTCGACTTC
ACCGAGCTCG TCCCGCCGTC CGCGCTCGCC GGCGACAAGT GGAAGAGCGA CCTCGGCGAC
CGCGCGATCG AGGGCCAGCA GGGCGTCGTC CAGACGATCA CCTTCCCGCT GTACGACAAG
GAGTACGGCG GTAACGCGGA CTTCCGGAAG GCGCTCTCGC TCGCGATCGA CCGGAAGACC
ATCACCGAGA AGATCTTCAA CAACGGCTGT ACCCCGATCG ACGGCTGGGT CTCCCCGATC
GTGGAGGGCT ACAAGCCGGG CGCCTGCGGC GAGTTCTGCA CCTACGACCC GGCCAAGGCC
CGGGAGTACC TCGCCAAGGC GAAGGCCGCC GGCTACACCC CGCCGAAGGA GTTCCCGCTC
TGGTACAACG GTGACTCCGC GCACAAGGAG TGGGTGGACG CCGTCGCCAA CAGCATCAAC
CAGGCCCTCG GCCCGGACGC CGGCTTCACC GTCGTCGGCA AGGCCACCCC GACCTTCGCC
GAGCTCCGGG ACCTCGTCAC GCAGCGGAAG ATCAAGGGAA TGTTCCGTAC CGGGTGGCAG
ATGGACTACC CGCACATCGA GAACTTCCTG AACCCGCTGT ACAAGACCGG CGCCTCGTCG
AACGACGGTG ACTACAGCAA CAAGGCGCTC GACGCCAAGC TGAGCGAGGC CGACCGCGAG
ACCGACCCGG CCAAGTCCCT GGCCCTCTAC CAGGAGGCCG AGGCTATGCT GGCCGAGGAC
ATGCCCGCCA TCCCGCTGTG GTCCTACGGG CTGCAGGCCG GCACCTCGAA GTGGGTGACG
GGGGTCAAGG TCACTCCGTT CGGCGTCCTC GATCCGCTGT CCATCGCGAT CAAGGAAGCG
TAA
 
Protein sequence
MRVTKGAKIA AGSALLALGV AACGGGGGGS GSETNPRAAD GTVYIRGCEP QTGLVPGNIN 
ETCGGTIADF IYSKLVKYNS DTAAPELDQA ESIETSDNRV WTIKLKPGLK WSDGTPVTAK
NYVDAWNYTA YSPNQQIGAP WFADIEGFED VYTEDPDGPD GPKEAPTPKS DKMSGLEVID
ELTFKVTLKA PQAVFRTKLG YSTFAPLPEA FFKDPKGFAQ NPISNGPFKF VKWDHNKEIV
VEANPDYHGA EKPKVKRIVY RMYQNDDAAY ADLLSNNLDF TELVPPSALA GDKWKSDLGD
RAIEGQQGVV QTITFPLYDK EYGGNADFRK ALSLAIDRKT ITEKIFNNGC TPIDGWVSPI
VEGYKPGACG EFCTYDPAKA REYLAKAKAA GYTPPKEFPL WYNGDSAHKE WVDAVANSIN
QALGPDAGFT VVGKATPTFA ELRDLVTQRK IKGMFRTGWQ MDYPHIENFL NPLYKTGASS
NDGDYSNKAL DAKLSEADRE TDPAKSLALY QEAEAMLAED MPAIPLWSYG LQAGTSKWVT
GVKVTPFGVL DPLSIAIKEA