Gene Tbis_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3288 
Symbol 
ID9169811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3840630 
End bp3841847 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily protein 
Protein accessionYP_003653871 
Protein GI296271239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.234831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCCA ACGTCGGCAC CTGGATGCAG CGGACCGCCC AGGACTGGCT CGTCCTCGAC 
CTCACCCGCG GCAGCGGCTC CGCCCTCGGC ATCACCGTGG CGCTGCAGTT CCTCCCGGTG
CTGCTGTTCG GGCTCTGGGG CGGGATGATC GCCGACCGCT ACCCCAAGCG GCGGGTGCTC
ATCGTGGCCC AGTCGCTCAT GGGGCTGCTC GCGCTGGTCA TGGGCGTGCT GGTGCTCAGC
GGCACGGCGC AGGTCTGGCA CGTCTACGTG ATGGCCTTCC TCCTCGGCTG CGTCTCCTGT
GTCGAGGTGC CGACCCGGCA GTCCTTCGTC GTGGAGATGG TCGGCCGGAA GGACCTGCCG
AACGCGATCG CGCTCAACAG CTCATCGTTC AACCTCGCCA GGGTCGTCGG ACCGGCCGTC
GCCGGCCTGC TCATCCACTG GCTGGGCACC GGGCCGATCT ACATGCTCAA CGCGGTGTCG
TTCGCCGCGG TCATCGCCGG CCTCGCCATG ATGCGCACCG CCGAGCTGCA CACCCCCGAG
CCGGTCAAGC GGGCCAAGGG CCAGCTCCGG GAGGGGTTCC GGTACGTCCG GCGCCGACCC
GCCCTGCTGC TGCCCATCCT CGTGGTCGGC TTCATGGCGA TCTTCATGCA GAGCTTCTCG
GCGAGCATCG CGCTGATGGC GCGCGAGGTC TTCAAGGCGG GGGCGTCCTC GTTCGGCATC
GCGTCGAGCG CGTTCGCGAT CGGAGCCCTC GGCGGCGCCT TGCTCGCCGC ACGGCGGGTG
GCGCCGAGCC GCCGGTTCCT GCTCATCGGG GCGATCTGCT TCGGGACCTT CCAGATCGCG
GCCGCGATCG CCCCGGCGTA CCCCGCCTTC CTCGCGGTGC TGCTCCCCGC CGGGATGGCG
ATGATCAGCG TGAACACGAC GGCGAATACG ATGGTGCAGC TCGGCGCCTC TCCCCACATG
CGCGGCCGGG TCACCGGGAT CTACGTCCTC GTGCTCACCG GCGGAGCGCC GATCGGGGCG
CCGCTGGTCG GGTGGCTGAC CGAGCTGATC GGCATCCGGG CCGCGGTCGC CACCGCGGGG
TCGCTGAGCG TCGCCGGGGT CGGCCTCGCC CTGCTGCTGA CCCGGCTCAT CGCGGGCAAG
ACCGAGGGTG AGAGAAAGGA ATCGGCGGGT GAGCCGGTTG TTCGTGGCCC TGCTACCGCC
GCAGAAGGCG CTGGATGA
 
Protein sequence
MISNVGTWMQ RTAQDWLVLD LTRGSGSALG ITVALQFLPV LLFGLWGGMI ADRYPKRRVL 
IVAQSLMGLL ALVMGVLVLS GTAQVWHVYV MAFLLGCVSC VEVPTRQSFV VEMVGRKDLP
NAIALNSSSF NLARVVGPAV AGLLIHWLGT GPIYMLNAVS FAAVIAGLAM MRTAELHTPE
PVKRAKGQLR EGFRYVRRRP ALLLPILVVG FMAIFMQSFS ASIALMAREV FKAGASSFGI
ASSAFAIGAL GGALLAARRV APSRRFLLIG AICFGTFQIA AAIAPAYPAF LAVLLPAGMA
MISVNTTANT MVQLGASPHM RGRVTGIYVL VLTGGAPIGA PLVGWLTELI GIRAAVATAG
SLSVAGVGLA LLLTRLIAGK TEGERKESAG EPVVRGPATA AEGAG