Gene Tbis_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3117 
Symbol 
ID9169636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3658133 
End bp3659272 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content74% 
IMG OID 
Productcystathionine gamma-lyase 
Protein accessionYP_003653704 
Protein GI296271072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000114351 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCACG GTTTCGAGAC CCTCGCGATC CACGCCGGTC AGGAGCCGGA CCCGCACACG 
GGCGCGGTCG TCCCGCCCAT CTACGCGGTC TCCACCTACA AGCAGGACGG CGTGGGCGGG
CTGCGGTCCG GGTACGAGTA CAGCCGCTCG GCCAACCCCA CCAGGACGGC CCTGGAGGAG
GCCCTCGCCG CGGTGGAGGG CGGCGTGCGC GGCCTGGCGT TCGCGTCCGG CCTGGCCGCC
GAGGACACGC TGATCCGCAC CGTCTGCCGC CCCGGGGACC ACGTGCTCAT CCCGGACGAC
GCGTACGGCG GCACCTACCG GCTGTTCGCG AAGGTGCTCG AGCGGTGGGG CCTCGCCTAC
GAGCCGGTGC CGATGGGCGA CCTCGACGCG GTGCGCGCGG CCGTGCGGGA CACCACCAAG
GTGATCTGGG TGGAGACGCC CACCAACCCG CTGCTCACGG TCGCGGACAT CGCCGCGCTC
GCGGGCATCG CGCACGAGGC CGGCGCGCTG CTCGTGGTGG ACAACACGTT CGCCTCGCCG
TACCTGCAGC AGCCGCTCGC GCTCGGCGCG GACGTGGTGG TGCACTCGAC CACCAAGTAC
ATCGGCGGCC ACTCCGACGT GGTCGGCGGC GCGCTGATCG TCCGCTCGAC CGAGCTGGGG
GAGCGGCTCG CCTACCACCA GAACGCGATG GGCGCGGTCG CCGGACCGTT CGACGCGTGG
CTCGTGCTGC GCGGGCTCAA GACGCTCGCG GTCCGGATGG AGCGGCACTG CGACAACGCC
GAGCGCGTCG TGGAGATGCT GCGCGCGCAC CCGCGGGTGA CCCAGGTGCT CTACCCCGGG
CTGCCCGGCC ACCCCGGCCA CGAGGTGGCG GCGAAGCAGA TGCGGCGGTT CGGCGGGATG
GTGTCGTTCC GGGTCGCCGG CGGCGAGGAG GAGGCGGTCG AGATCTGCGG CCGGACCCGC
CTGTTCACCC TCGGCGAGTC GCTCGGCGGG GTGGAGTCCC TGATCGAGCA CCCGGGCCGG
ATGACCCACG CCTCGGCCGC CGGGTCGCCC CTCGAGGTCC CGTCCGACCT CATCCGGCTG
TCGGTCGGCA TCGAGACCAT CGACGACCTG CTCGCCGACC TCGCCCAGGC GCTCGGCTGA
 
Protein sequence
MNHGFETLAI HAGQEPDPHT GAVVPPIYAV STYKQDGVGG LRSGYEYSRS ANPTRTALEE 
ALAAVEGGVR GLAFASGLAA EDTLIRTVCR PGDHVLIPDD AYGGTYRLFA KVLERWGLAY
EPVPMGDLDA VRAAVRDTTK VIWVETPTNP LLTVADIAAL AGIAHEAGAL LVVDNTFASP
YLQQPLALGA DVVVHSTTKY IGGHSDVVGG ALIVRSTELG ERLAYHQNAM GAVAGPFDAW
LVLRGLKTLA VRMERHCDNA ERVVEMLRAH PRVTQVLYPG LPGHPGHEVA AKQMRRFGGM
VSFRVAGGEE EAVEICGRTR LFTLGESLGG VESLIEHPGR MTHASAAGSP LEVPSDLIRL
SVGIETIDDL LADLAQALG