Gene Tbis_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3108 
Symbol 
ID9169627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3647087 
End bp3648190 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content69% 
IMG OID 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_003653695 
Protein GI296271063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.901238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000563542 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGACG TCTTCCCTCT TCACGGCATG GATGCGGTGG TCTTCGCCGT CGGCAACGCG 
AAGCTCGCCG CGCACTTCTA CGCCACCGCC TTCGGCATGC GCCTCGTCGC CTACCGCGGC
CCGGAGACCG GCTGCCGGGA CGAGGTCTCC TACGTCCTTG AGTCCGGATC CGCGCGCTTC
GAGCTGCGCG GCGCCGTACG GGCCGGCACC CCCCTCGCCC GGCACGTGGC CGAGCACGGC
GACGGCGTCA TCGACCTCGC CCTCGAGGTG CCGGACGCCG CGGCCGCCTA CCGGCACGCG
GTCTCCAAGG GCGCCAAGGG CCTCGTGGAG CCGCACGTCG TCGAGGACGA GCACGGCAAG
GTCGTGCTCG CCGCCATCGC CACCTACGGC GAGACCCGGC ACACCCTGGT GGAGCGCTCC
GGGTACCACG GCCCCTACCT GCCCGGGTAC GTCGCCGCCG ACCCGATCGT GCCGCCGCCC
AACGTCAAGA ACGGCCGGCT CTTCCAGGCG ATCGACCACT GCGTGGGCAA CGTCGAGCGC
ATGGACGAGT GGGTCGAGTT CTACGAGCGG ATCATGGGCT TCACCAAGAT GGCGGAGTTC
ATCGGCGACG ACATCGCGAC CGAGTACTCG GCCCTGATGT CCAAGGTCGT CGCCGACGGC
ACCCGGAAGG TGAAGTTCCC GCTCAACGAG CCGGCGACCG GCAAGCGCAA GTCGCAGATC
GAGGAGTTCC TCGAGTTCTA CGGCGGCCCC GGCGTGCAGC ACGTCGCGCT GCTCACCAAC
GACATCATCG CCGCGATCGA CCACATGAGG CAGGCCGGCG TGGAGTTCCT CGACACGCCC
GACGCCTACT ACGACGACCC CGAGCTGCGC GCCCGGATCG GCGAGGTCAG GGTGCCGATC
GAGGAGCTCA AGAAGCGCCG GATCCTGGTC GACCGGGACG AGGACGGCTA CCTGCTCCAG
ATCTTCACCA AGCCCGTGGG CGACCGGCCG ACGTTCTTCT TCGAGCTGAT CGAGCGGCAC
GGCTCCCTCG GCTTCGGCAA GGGCAACTTC AAGGCGCTCT TCGAGGCGAT CGAGCGGGAG
CAGGCCCGCC GCGGCAACCT CTGA
 
Protein sequence
MTDVFPLHGM DAVVFAVGNA KLAAHFYATA FGMRLVAYRG PETGCRDEVS YVLESGSARF 
ELRGAVRAGT PLARHVAEHG DGVIDLALEV PDAAAAYRHA VSKGAKGLVE PHVVEDEHGK
VVLAAIATYG ETRHTLVERS GYHGPYLPGY VAADPIVPPP NVKNGRLFQA IDHCVGNVER
MDEWVEFYER IMGFTKMAEF IGDDIATEYS ALMSKVVADG TRKVKFPLNE PATGKRKSQI
EEFLEFYGGP GVQHVALLTN DIIAAIDHMR QAGVEFLDTP DAYYDDPELR ARIGEVRVPI
EELKKRRILV DRDEDGYLLQ IFTKPVGDRP TFFFELIERH GSLGFGKGNF KALFEAIERE
QARRGNL